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The map label for this gene is ybhB [C]

Identifier: 84625890

GI number: 84625890

Start: 4784435

End: 4785046

Strand: Reverse

Name: ybhB [C]

Synonym: XOO_4233

Alternate gene names: 84625890

Gene position: 4785046-4784435 (Counterclockwise)

Preceding gene: 84625891

Following gene: 84625889

Centisome position: 96.86

GC content: 65.85

Gene sequence:

>612_bases
ATGCGTCTGACCAGCAACAGCATCGAAAACGGCAAGCCCATCGCTGTGGAATTTGCCGCCGGTACGCCGGATGGCTTCGC
ACCCAACCGCAACCCGCACCTGGCCTGGAGCGAGGTGCCGACCGGTACGCAGTCATTCGCGCTGTTGTGCCTGGACCCGG
ATGTACCGACCGTGCCCGACACCGTCGGCCGCGACGACCTGCAGATTCCAGTCGAGCAGCCACGCACCGATTTCGTGCAT
TGGGCGATGGCCGATATCTCCGCCGATGTGCATGAGATTGCCGCCGGCAGCTGCAGCGACGGCTTTGTGGTCAAGGGCAA
GCAGCAACCGCCCGGCCCGGCCGGTGCCCGGCAGGGCCTGAATTCCTACACGCAGTGGTTCGCCGGCAATGCCGACATGG
CCGGCGACTACCGCGGCTACGACGGCCCGTACCCGCCGTTCAACGACCTGCGCATGCACCGCTATTTCTTCCGGGTGTTC
GCGCTGGACGTTGCCAAGCTCAGCCTGCCCGACCGCTTCACCGCCGCCGACGTGCTGTCGGCGATTCAGGGCCATGTGCT
GGCGGAAGCCGCGTTGCATGGCACCTACACGTTGAACCCAGCGCTGCGCTGA

Upstream 100 bases:

>100_bases
TAAACCCGAGCGAGCGCATCAGAAGGTTCCATGCCGATGTCTTTCGCTCCGGCCCGGACCCAGGCACCCTGATCCGTATC
GCTTTTCTCGGAGACCCTCC

Downstream 100 bases:

>100_bases
GTCATCGCGACGATGGCGTCGAATGCGCCATCCCCGACGACGCCAGCCACGTTCGGCCGGCGTCTCAGTACAGGCAGTCC
CCCTTGAAAGCATTCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MRLTSNSIENGKPIAVEFAAGTPDGFAPNRNPHLAWSEVPTGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRMHRYFFRVF
ALDVAKLSLPDRFTAADVLSAIQGHVLAEAALHGTYTLNPALR

Sequences:

>Translated_203_residues
MRLTSNSIENGKPIAVEFAAGTPDGFAPNRNPHLAWSEVPTGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRMHRYFFRVF
ALDVAKLSLPDRFTAADVLSAIQGHVLAEAALHGTYTLNPALR
>Mature_203_residues
MRLTSNSIENGKPIAVEFAAGTPDGFAPNRNPHLAWSEVPTGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRMHRYFFRVF
ALDVAKLSLPDRFTAADVLSAIQGHVLAEAALHGTYTLNPALR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=197, Percent_Identity=27.4111675126904, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1786757, Length=200, Percent_Identity=26.5, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 21984; Mature: 21984

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSNSIENGKPIAVEFAAGTPDGFAPNRNPHLAWSEVPTGTQSFALLCLDPDVPTVPD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCC
TVGRDDLQIPVEQPRTDFVHWAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGL
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH
NSYTQWFAGNADMAGDYRGYDGPYPPFNDLRMHRYFFRVFALDVAKLSLPDRFTAADVLS
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AIQGHVLAEAALHGTYTLNPALR
HHHHHHHHHHHHCCEEEECCCCC
>Mature Secondary Structure
MRLTSNSIENGKPIAVEFAAGTPDGFAPNRNPHLAWSEVPTGTQSFALLCLDPDVPTVPD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCC
TVGRDDLQIPVEQPRTDFVHWAMADISADVHEIAAGSCSDGFVVKGKQQPPGPAGARQGL
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH
NSYTQWFAGNADMAGDYRGYDGPYPPFNDLRMHRYFFRVFALDVAKLSLPDRFTAADVLS
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AIQGHVLAEAALHGTYTLNPALR
HHHHHHHHHHHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]