| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625862
Identifier: 84625862
GI number: 84625862
Start: 4748451
End: 4748885
Strand: Reverse
Name: 84625862
Synonym: XOO_4205
Alternate gene names: NA
Gene position: 4748885-4748451 (Counterclockwise)
Preceding gene: 84625865
Following gene: 84625861
Centisome position: 96.13
GC content: 65.52
Gene sequence:
>435_bases ATGGAAGATGCTATGGCTCGTATGATCATCGTAGTGGGGGACCGCACCACGGGTGGCGGTACCGTGGTCAGCGGTTCGCT GGAAACCGATATCGACGGCATGCCCGTCGCTCGCGTCGGCGATCGCGTCACCTGCCGCAAACATCCCGGTGTCCACACGA TCGCCACCGGCGATATCACGTTGATGATTGAAGGGCAGCCGGTCGCTCGTCACGGAGACCGGCTGTCCTGCGGTTGCCAG TTGCTGTCAGGCAGGCAGGATCATGCATATTTCGCCCAGGGTGCTGGCGTCGCCGAGGACGCGCTCATCGACGCGGTGGC CAAACCTGCGTCATCGGGTGCCGTGGCGCTGGCCGATCCCGCAGACAAAGGCGAGGTCTGCGAGCAATGCCTGCGTGCCG GAGCCGCCCGCGCTGCGGCCATGCTGGGGCGCTGA
Upstream 100 bases:
>100_bases CACGTTTTGTCGCCCGAAGCGGTAAAGCCATCTAGCGACCGGAACCGCACTTGACAGCGCAACTAACAAGTGCGAAAAGC CTGAGAGCTGGTGGCTGCGC
Downstream 100 bases:
>100_bases CCATGCAGCGCTACGTGCTCGTCGATGCCTCGGCCCGTCCCGATACCCCGCAGGCGTTGCGCTACTACCTGCAGGACCTG CCGCACCGTTCCCTGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEDAMARMIIVVGDRTTGGGTVVSGSLETDIDGMPVARVGDRVTCRKHPGVHTIATGDITLMIEGQPVARHGDRLSCGCQ LLSGRQDHAYFAQGAGVAEDALIDAVAKPASSGAVALADPADKGEVCEQCLRAGAARAAAMLGR
Sequences:
>Translated_144_residues MEDAMARMIIVVGDRTTGGGTVVSGSLETDIDGMPVARVGDRVTCRKHPGVHTIATGDITLMIEGQPVARHGDRLSCGCQ LLSGRQDHAYFAQGAGVAEDALIDAVAKPASSGAVALADPADKGEVCEQCLRAGAARAAAMLGR >Mature_144_residues MEDAMARMIIVVGDRTTGGGTVVSGSLETDIDGMPVARVGDRVTCRKHPGVHTIATGDITLMIEGQPVARHGDRLSCGCQ LLSGRQDHAYFAQGAGVAEDALIDAVAKPASSGAVALADPADKGEVCEQCLRAGAARAAAMLGR
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14714; Mature: 14714
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDAMARMIIVVGDRTTGGGTVVSGSLETDIDGMPVARVGDRVTCRKHPGVHTIATGDIT CCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHCCCEEEECCCCCEEEEECCCEE LMIEGQPVARHGDRLSCGCQLLSGRQDHAYFAQGAGVAEDALIDAVAKPASSGAVALADP EEECCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECC ADKGEVCEQCLRAGAARAAAMLGR CCHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MEDAMARMIIVVGDRTTGGGTVVSGSLETDIDGMPVARVGDRVTCRKHPGVHTIATGDIT CCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHCCCEEEECCCCCEEEEECCCEE LMIEGQPVARHGDRLSCGCQLLSGRQDHAYFAQGAGVAEDALIDAVAKPASSGAVALADP EEECCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECC ADKGEVCEQCLRAGAARAAAMLGR CCHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA