| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625861
Identifier: 84625861
GI number: 84625861
Start: 4747840
End: 4748448
Strand: Reverse
Name: 84625861
Synonym: XOO_4204
Alternate gene names: NA
Gene position: 4748448-4747840 (Counterclockwise)
Preceding gene: 84625862
Following gene: 84625860
Centisome position: 96.12
GC content: 67.82
Gene sequence:
>609_bases ATGCAGCGCTACGTGCTCGTCGATGCCTCGGCCCGTCCCGATACCCCGCAGGCGTTGCGCTACTACCTGCAGGACCTGCC GCACCGTTCCCTGTTCGCCCGCCAGCCCGAGGCCGAGCACGCCGATCTTGGGCCCTGGCTGGTGCAACTGCCCGAGTTCG GCCAAGCCCCCATCGAAGGCTGGCTCAGGGCCCTGGAGCTGGGGCATCCCGCGGTTGCCTGGCTCGCTAGTGCGGGCGAC TTCGACGCCGTGTTCGACCACTTGGAAACCTGCCTGGATCTGCGCCGTCCGAACGGCACATTGGCGCTGCTGCGCTACTG GGACGGACGGGTGTTCGTCCGCCTGCAACGGATTCTGACCGCCAACCAGCGCTTGCAATTGCTCGGGCCAATCGCGCGTT GGCGAACGCGTGTGCTGGGCGAGGATGTGGTGGTGAGCCTCTCGGCCACCGACGGACAGGAGCACAGCGATGCGCGAGAT CACCGCGCAGCAGGACGCCTTGCTGCGGTTACCCGATCCCTCGCAATTGCTGCCCAAGCTCGCGCAGGAGATACGGCGCG ATCATGGCCACGCGGTGGCGCACCTGTCGCCCCAGGCGCTGCGCGATGA
Upstream 100 bases:
>100_bases GTGCCGTGGCGCTGGCCGATCCCGCAGACAAAGGCGAGGTCTGCGAGCAATGCCTGCGTGCCGGAGCCGCCCGCGCTGCG GCCATGCTGGGGCGCTGACC
Downstream 100 bases:
>100_bases GGTAGCCCGCAGTCACGACCATGCGGCCTACGCGTTGAAGATCACCCACCTGCCCACCCTGGTGGCCTGGATCAAGGCGG ATGTCGCCTGGGCACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MQRYVLVDASARPDTPQALRYYLQDLPHRSLFARQPEAEHADLGPWLVQLPEFGQAPIEGWLRALELGHPAVAWLASAGD FDAVFDHLETCLDLRRPNGTLALLRYWDGRVFVRLQRILTANQRLQLLGPIARWRTRVLGEDVVVSLSATDGQEHSDARD HRAAGRLAAVTRSLAIAAQARAGDTARSWPRGGAPVAPGAAR
Sequences:
>Translated_202_residues MQRYVLVDASARPDTPQALRYYLQDLPHRSLFARQPEAEHADLGPWLVQLPEFGQAPIEGWLRALELGHPAVAWLASAGD FDAVFDHLETCLDLRRPNGTLALLRYWDGRVFVRLQRILTANQRLQLLGPIARWRTRVLGEDVVVSLSATDGQEHSDARD HRAAGRLAAVTRSLAIAAQARAGDTARSWPRGGAPVAPGAAR >Mature_202_residues MQRYVLVDASARPDTPQALRYYLQDLPHRSLFARQPEAEHADLGPWLVQLPEFGQAPIEGWLRALELGHPAVAWLASAGD FDAVFDHLETCLDLRRPNGTLALLRYWDGRVFVRLQRILTANQRLQLLGPIARWRTRVLGEDVVVSLSATDGQEHSDARD HRAAGRLAAVTRSLAIAAQARAGDTARSWPRGGAPVAPGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22307; Mature: 22307
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRYVLVDASARPDTPQALRYYLQDLPHRSLFARQPEAEHADLGPWLVQLPEFGQAPIEG CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHH WLRALELGHPAVAWLASAGDFDAVFDHLETCLDLRRPNGTLALLRYWDGRVFVRLQRILT HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ANQRLQLLGPIARWRTRVLGEDVVVSLSATDGQEHSDARDHRAAGRLAAVTRSLAIAAQA HCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RAGDTARSWPRGGAPVAPGAAR CCCCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQRYVLVDASARPDTPQALRYYLQDLPHRSLFARQPEAEHADLGPWLVQLPEFGQAPIEG CCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHH WLRALELGHPAVAWLASAGDFDAVFDHLETCLDLRRPNGTLALLRYWDGRVFVRLQRILT HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ANQRLQLLGPIARWRTRVLGEDVVVSLSATDGQEHSDARDHRAAGRLAAVTRSLAIAAQA HCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RAGDTARSWPRGGAPVAPGAAR CCCCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA