| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625759
Identifier: 84625759
GI number: 84625759
Start: 4626586
End: 4629183
Strand: Reverse
Name: 84625759
Synonym: XOO_4102
Alternate gene names: NA
Gene position: 4629183-4626586 (Counterclockwise)
Preceding gene: 84625760
Following gene: 84625757
Centisome position: 93.7
GC content: 64.86
Gene sequence:
>2598_bases ATGCGGATGCAGCGGCAGGGATGCGTGCAGGCGCAGATTGCAGGGCAATCGGGCATGCTAACCTACTGGGATAACCGCCG AGATATGCCGATGATCGCCTCGCACCGATGGACAGCGTTGTTCGTGCTCGTCATCCTGATGCCGTTGCCTGCGTTTGCAG GGACGCCGGAGGGCGGTTACCGGCAGCCGCCAGAGCCGCTGCTGAGCGTGATGCGCGCGCCGCTCAATCCATCGCCGCGG CCGGATCCTACCGGCAGGACCTTGTTGCTGGTGCAGCGCACCCAGTATCCGCCGATCGCACGGGTGGCCGAGCCCTATCT CAAGCTGGCCGGCGTGCGCGTGGAGCCGCGCACGCATAGTCGCCACGACATGTCCAACGGATACGGCATTCGTTCCTGCC TGGAGGGCTTCAGCCTGGTGGATATCGCCAGCGGCAAGCAGACGGCCGTGAGCTTGCCGGCCGGCGCCTGTCCGGCATTG CCGGTGTGGTCGCCGGATGGGCGCCGGTTCGCCTTCAACAATACGGCGGCCGACCATGTCGAACTCTGGGTGGGAGACGT TGCGACCGGGCAGGTACGCAAGATCGACGGTGTGCAGCTCAATCCTGTGCTTGGCGGCGAGATCCAATGGCTGGGCGGCA GCAGCACCCTGCTGTTGAAGACCGTGCCGCAGGATCTGGGTCCCGCACCGCGCAAGGCGGCGGTGCCGCCAGGCCCGGAG GTCAAGGAAACCATCCAGGGCAAGGGCGAAAGCAGCACCTATGAGGCCCGCGATACGCTGTCCAGTCCGCAGGACGAGGC GTTGTTCACCTATTACGCCACCGCGCAACTGCTCACGGTAGATGCGGCAACCGGCAGTCAGCGCAAGCTCGGGACGCCTG CGGTCTACAGCAACGTCGATGGCGCGCCCGATGGTCGCCACGTGCTGGTAGAACGGTTGAAGCCGCCGTATTCCTACGTC ACCACCTATGCGCGGTTTGCCCACGATGTGGCGGTGTTGGACCTGGAAACTGGCAACGAGCGTGTGCTTGCCAATCTGCC GGTCGCGGACCGGGTGCCGGTGCAGGGCGTGCCAACCGGTCCACGCGCCTACGCCTGGCGTGCCAATCAACCAGCCACGC TGGTCTGGGCCGAGGCGCTGGACGGCGGCGACTGGAAAACCAGCGTGCCCGCTCGCGATACGTTGATGACGCTGGCGGCA CCGTTCACCGCCAAACCGCGCGCGCTTGCGCGCGTGCAGCAGCGGTATGCAGGCCTGTCGTGGTTTGCAGAAGGCGGGCA AGCCTTGCTGGACGAGTACGACGAGAATCGCCATTGGCGGCGCACCACGCTCGTGGATGCCGACCGCCCCGGCGCTGGCG AGCGCGTGTTGTTCGACCTGTCCACCGACGATCTGTATGCCGATCCCGGCTTGCCCGAAATGCGCGTGCTCGCCAACGGC CAAGCCGTGCTGCGCGAGGCGCAAGGTGCGTTGTTCCTGAGTGGGCAAGGCGCCTCGCCCGCGGGCGACCGGCCGTTTCT GGATCGCTACACGCTTGCCACCGGCAAGAGCCAGCGGCTGTTTCGCAGCGACGCGCATGTGGACGAGGTGTTCTTCGGAT TTGCAGGCGACGAGACGTCGCGCCTGCTGACCTGGCATCAGTCGCTGACCGACCCGCCTAACGTGTATGTGCGGACCTTG GGCGAACCGCTACCGGCGCCGGCTGCGGGCGAAGCCGCCTTTGCGTCCACTGCCACGCCGGTGACGCATTTCGCGGACCC GACCCCGCTGGTGAGGCAGATCAAGAAGCGTTTGGTGAGCTACAAGCGCAAGGACGGCGTGGACTTGTCGTTCACCCTGT ACACACCGCCCGGCTACAAGGAAGGCACGCGCGTGCCGGCCATCCTGTACGCCTACCCGCTCGACTATGCCGATCCCTCC AAAGCTGGCCAGGTCAGCGGCGCCAGCGAGCGCGATTTCACTCGTCTCAATTACTACCAGCTGCTGCTATTGGCCGGCTA CGCCATTATCGACGATGCCGCTTTCCCTATCGTGGGCGACCCCAAGACCGCCTACGACACCTACCTGCAGCAACTGGTCG ATGACGCCACCGCCGCGGTGGACAAGGCCGTGGAGTTGGGCGTGGTCGACCGTCAGCGCATCGGCGTCACCGGCCATAGC CACGGCGCGTTGATGACGGCCAATCTGTTGGCGCATACAGATCTGTTTCGCGCCGGTGCCGCCACCAGCGGCAGCTACAA CAAGACCTTGACGCCATTCGGATTCCAGAGCGAACGTCGGTCGTTCTGGAAAGCGCCGGACGTCTATGCGCAAGCGTCGG CATTCTTCCACGCCGATAAAATCAACGAACCGTTGTTGATCGTGCATGGCATGGACGATGCAAACCCCGGTACCGAAACC ACCCAGGCACCGCGCTTGTTTCAGGCCATTCGGGGCAACGGTGGCACCGCACGCCTGGTGCTCTTGCCCTTCGAACCGCA CTGGTACAGCGCACGCGAATCCAATGAAGACCTGGTGGCCGAAATGCTGGAATGGTTCGACCGTTACGTCAAAAACGCAC CGCCGCGCGACGCGCAGCACGCCAACGATGTGAGATGA
Upstream 100 bases:
>100_bases TGCACTGGAGACGCATGCGGTGCAGATTGCCGACTACATCAGTGATGTTCTCTCGCGTACGCTCAGAGCAGCGGGATAAC GCGGTCAGTTTGTATCCGCA
Downstream 100 bases:
>100_bases CGCGCAACGCACACCAAGGCGGCACTTGCCGGGCTAAAGCGGCTAACAAAACGTCGCGAGCGCTCGTCAGGTGGGCGTGG ACGGCGCGCTCAGAACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutamyl Peptidase; Aminoacyl Peptidase; Hydrolase; Peptidase S9 Prolyl Oligopeptidase Active Site Region; Peptidase S9A/B/C Family Catalytic Domain Protein; Prolyl Oligopeptidase; S9C Family Peptidase; Acylaminoacyl-Peptidase; Exported Oligopeptidase; Secreted Protein
Number of amino acids: Translated: 865; Mature: 865
Protein sequence:
>865_residues MRMQRQGCVQAQIAGQSGMLTYWDNRRDMPMIASHRWTALFVLVILMPLPAFAGTPEGGYRQPPEPLLSVMRAPLNPSPR PDPTGRTLLLVQRTQYPPIARVAEPYLKLAGVRVEPRTHSRHDMSNGYGIRSCLEGFSLVDIASGKQTAVSLPAGACPAL PVWSPDGRRFAFNNTAADHVELWVGDVATGQVRKIDGVQLNPVLGGEIQWLGGSSTLLLKTVPQDLGPAPRKAAVPPGPE VKETIQGKGESSTYEARDTLSSPQDEALFTYYATAQLLTVDAATGSQRKLGTPAVYSNVDGAPDGRHVLVERLKPPYSYV TTYARFAHDVAVLDLETGNERVLANLPVADRVPVQGVPTGPRAYAWRANQPATLVWAEALDGGDWKTSVPARDTLMTLAA PFTAKPRALARVQQRYAGLSWFAEGGQALLDEYDENRHWRRTTLVDADRPGAGERVLFDLSTDDLYADPGLPEMRVLANG QAVLREAQGALFLSGQGASPAGDRPFLDRYTLATGKSQRLFRSDAHVDEVFFGFAGDETSRLLTWHQSLTDPPNVYVRTL GEPLPAPAAGEAAFASTATPVTHFADPTPLVRQIKKRLVSYKRKDGVDLSFTLYTPPGYKEGTRVPAILYAYPLDYADPS KAGQVSGASERDFTRLNYYQLLLLAGYAIIDDAAFPIVGDPKTAYDTYLQQLVDDATAAVDKAVELGVVDRQRIGVTGHS HGALMTANLLAHTDLFRAGAATSGSYNKTLTPFGFQSERRSFWKAPDVYAQASAFFHADKINEPLLIVHGMDDANPGTET TQAPRLFQAIRGNGGTARLVLLPFEPHWYSARESNEDLVAEMLEWFDRYVKNAPPRDAQHANDVR
Sequences:
>Translated_865_residues MRMQRQGCVQAQIAGQSGMLTYWDNRRDMPMIASHRWTALFVLVILMPLPAFAGTPEGGYRQPPEPLLSVMRAPLNPSPR PDPTGRTLLLVQRTQYPPIARVAEPYLKLAGVRVEPRTHSRHDMSNGYGIRSCLEGFSLVDIASGKQTAVSLPAGACPAL PVWSPDGRRFAFNNTAADHVELWVGDVATGQVRKIDGVQLNPVLGGEIQWLGGSSTLLLKTVPQDLGPAPRKAAVPPGPE VKETIQGKGESSTYEARDTLSSPQDEALFTYYATAQLLTVDAATGSQRKLGTPAVYSNVDGAPDGRHVLVERLKPPYSYV TTYARFAHDVAVLDLETGNERVLANLPVADRVPVQGVPTGPRAYAWRANQPATLVWAEALDGGDWKTSVPARDTLMTLAA PFTAKPRALARVQQRYAGLSWFAEGGQALLDEYDENRHWRRTTLVDADRPGAGERVLFDLSTDDLYADPGLPEMRVLANG QAVLREAQGALFLSGQGASPAGDRPFLDRYTLATGKSQRLFRSDAHVDEVFFGFAGDETSRLLTWHQSLTDPPNVYVRTL GEPLPAPAAGEAAFASTATPVTHFADPTPLVRQIKKRLVSYKRKDGVDLSFTLYTPPGYKEGTRVPAILYAYPLDYADPS KAGQVSGASERDFTRLNYYQLLLLAGYAIIDDAAFPIVGDPKTAYDTYLQQLVDDATAAVDKAVELGVVDRQRIGVTGHS HGALMTANLLAHTDLFRAGAATSGSYNKTLTPFGFQSERRSFWKAPDVYAQASAFFHADKINEPLLIVHGMDDANPGTET TQAPRLFQAIRGNGGTARLVLLPFEPHWYSARESNEDLVAEMLEWFDRYVKNAPPRDAQHANDVR >Mature_865_residues MRMQRQGCVQAQIAGQSGMLTYWDNRRDMPMIASHRWTALFVLVILMPLPAFAGTPEGGYRQPPEPLLSVMRAPLNPSPR PDPTGRTLLLVQRTQYPPIARVAEPYLKLAGVRVEPRTHSRHDMSNGYGIRSCLEGFSLVDIASGKQTAVSLPAGACPAL PVWSPDGRRFAFNNTAADHVELWVGDVATGQVRKIDGVQLNPVLGGEIQWLGGSSTLLLKTVPQDLGPAPRKAAVPPGPE VKETIQGKGESSTYEARDTLSSPQDEALFTYYATAQLLTVDAATGSQRKLGTPAVYSNVDGAPDGRHVLVERLKPPYSYV TTYARFAHDVAVLDLETGNERVLANLPVADRVPVQGVPTGPRAYAWRANQPATLVWAEALDGGDWKTSVPARDTLMTLAA PFTAKPRALARVQQRYAGLSWFAEGGQALLDEYDENRHWRRTTLVDADRPGAGERVLFDLSTDDLYADPGLPEMRVLANG QAVLREAQGALFLSGQGASPAGDRPFLDRYTLATGKSQRLFRSDAHVDEVFFGFAGDETSRLLTWHQSLTDPPNVYVRTL GEPLPAPAAGEAAFASTATPVTHFADPTPLVRQIKKRLVSYKRKDGVDLSFTLYTPPGYKEGTRVPAILYAYPLDYADPS KAGQVSGASERDFTRLNYYQLLLLAGYAIIDDAAFPIVGDPKTAYDTYLQQLVDDATAAVDKAVELGVVDRQRIGVTGHS HGALMTANLLAHTDLFRAGAATSGSYNKTLTPFGFQSERRSFWKAPDVYAQASAFFHADKINEPLLIVHGMDDANPGTET TQAPRLFQAIRGNGGTARLVLLPFEPHWYSARESNEDLVAEMLEWFDRYVKNAPPRDAQHANDVR
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94500; Mature: 94500
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMQRQGCVQAQIAGQSGMLTYWDNRRDMPMIASHRWTALFVLVILMPLPAFAGTPEGGY CCCCHHCCCEEEECCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC RQPPEPLLSVMRAPLNPSPRPDPTGRTLLLVQRTQYPPIARVAEPYLKLAGVRVEPRTHS CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCC RHDMSNGYGIRSCLEGFSLVDIASGKQTAVSLPAGACPALPVWSPDGRRFAFNNTAADHV CCCCCCCCCHHHHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEE ELWVGDVATGQVRKIDGVQLNPVLGGEIQWLGGSSTLLLKTVPQDLGPAPRKAAVPPGPE EEEECCCCCCCEEECCCEEECCCCCCEEEEECCCCEEEEEECCHHCCCCCCCCCCCCCCC VKETIQGKGESSTYEARDTLSSPQDEALFTYYATAQLLTVDAATGSQRKLGTPAVYSNVD HHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHCCCCC GAPDGRHVLVERLKPPYSYVTTYARFAHDVAVLDLETGNERVLANLPVADRVPVQGVPTG CCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC PRAYAWRANQPATLVWAEALDGGDWKTSVPARDTLMTLAAPFTAKPRALARVQQRYAGLS CCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHH WFAEGGQALLDEYDENRHWRRTTLVDADRPGAGERVLFDLSTDDLYADPGLPEMRVLANG HHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCEEEEECC QAVLREAQGALFLSGQGASPAGDRPFLDRYTLATGKSQRLFRSDAHVDEVFFGFAGDETS HHHHHHCCCEEEEECCCCCCCCCCCCCHHEEECCCCCHHHHHCCCCHHHEEEECCCCCCH RLLTWHQSLTDPPNVYVRTLGEPLPAPAAGEAAFASTATPVTHFADPTPLVRQIKKRLVS HHEEEHHHCCCCCCHHHEECCCCCCCCCCCCCHHCCCCCCHHHCCCCCHHHHHHHHHHHH YKRKDGVDLSFTLYTPPGYKEGTRVPAILYAYPLDYADPSKAGQVSGASERDFTRLNYYQ HHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH LLLLAGYAIIDDAAFPIVGDPKTAYDTYLQQLVDDATAAVDKAVELGVVDRQRIGVTGHS HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC HGALMTANLLAHTDLFRAGAATSGSYNKTLTPFGFQSERRSFWKAPDVYAQASAFFHADK CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHEECCC INEPLLIVHGMDDANPGTETTQAPRLFQAIRGNGGTARLVLLPFEPHWYSARESNEDLVA CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHH EMLEWFDRYVKNAPPRDAQHANDVR HHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRMQRQGCVQAQIAGQSGMLTYWDNRRDMPMIASHRWTALFVLVILMPLPAFAGTPEGGY CCCCHHCCCEEEECCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC RQPPEPLLSVMRAPLNPSPRPDPTGRTLLLVQRTQYPPIARVAEPYLKLAGVRVEPRTHS CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCC RHDMSNGYGIRSCLEGFSLVDIASGKQTAVSLPAGACPALPVWSPDGRRFAFNNTAADHV CCCCCCCCCHHHHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEE ELWVGDVATGQVRKIDGVQLNPVLGGEIQWLGGSSTLLLKTVPQDLGPAPRKAAVPPGPE EEEECCCCCCCEEECCCEEECCCCCCEEEEECCCCEEEEEECCHHCCCCCCCCCCCCCCC VKETIQGKGESSTYEARDTLSSPQDEALFTYYATAQLLTVDAATGSQRKLGTPAVYSNVD HHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHCCCCC GAPDGRHVLVERLKPPYSYVTTYARFAHDVAVLDLETGNERVLANLPVADRVPVQGVPTG CCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC PRAYAWRANQPATLVWAEALDGGDWKTSVPARDTLMTLAAPFTAKPRALARVQQRYAGLS CCCEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHH WFAEGGQALLDEYDENRHWRRTTLVDADRPGAGERVLFDLSTDDLYADPGLPEMRVLANG HHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCEEEEECC QAVLREAQGALFLSGQGASPAGDRPFLDRYTLATGKSQRLFRSDAHVDEVFFGFAGDETS HHHHHHCCCEEEEECCCCCCCCCCCCCHHEEECCCCCHHHHHCCCCHHHEEEECCCCCCH RLLTWHQSLTDPPNVYVRTLGEPLPAPAAGEAAFASTATPVTHFADPTPLVRQIKKRLVS HHEEEHHHCCCCCCHHHEECCCCCCCCCCCCCHHCCCCCCHHHCCCCCHHHHHHHHHHHH YKRKDGVDLSFTLYTPPGYKEGTRVPAILYAYPLDYADPSKAGQVSGASERDFTRLNYYQ HHHCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH LLLLAGYAIIDDAAFPIVGDPKTAYDTYLQQLVDDATAAVDKAVELGVVDRQRIGVTGHS HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC HGALMTANLLAHTDLFRAGAATSGSYNKTLTPFGFQSERRSFWKAPDVYAQASAFFHADK CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHEECCC INEPLLIVHGMDDANPGTETTQAPRLFQAIRGNGGTARLVLLPFEPHWYSARESNEDLVA CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHH EMLEWFDRYVKNAPPRDAQHANDVR HHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA