| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625730
Identifier: 84625730
GI number: 84625730
Start: 4594974
End: 4595933
Strand: Reverse
Name: 84625730
Synonym: XOO_4073
Alternate gene names: NA
Gene position: 4595933-4594974 (Counterclockwise)
Preceding gene: 84625731
Following gene: 84625727
Centisome position: 93.03
GC content: 55.21
Gene sequence:
>960_bases ATGCCATACGAGCTAAAGGATCGCTTGGTCATTGGGGTTGCATCGAGTGCTGTGTTCGATTTGCGGCACTCGGATGCCGT GTTCAGGAGCCAAGGCGAGGAACAGTATCGGAAGTATCAGGAAGAGAACCTGGGCTCCCCGCTGCCTAAGGGAATAGCTT TCCCCTTCATAAAGCGCCTTCTTGCGCTCAACGACCTCAGCCCAGATCCCACGGATCCTTTGGTCGAGGTCGTGCTTCTC TCCCGCAACGATCCAGATACTGGCCTGCGGGTGATGAAGACTATTGAGCACTACGGCCTAGGGATGACAAGAGCGATCTT CATGCAGGGGCGGTCGCCCTACGAGTACATTCCTGCTCTCAACATCGCACTCTTCCTGTCTGGACATAAGCCAGATGTCG AGGCTGCAATTGGCCTTGGCCATCCCGCCGGGCAAGTGCTCGATTCAGAGTTTGACGATGATGAAGATGATAAGACTCTT CGCATAGCGTTCGACTTCGATGGTGTCCTCGCGGGGGACGAATCAGAATCGGTGATGCAAGCCTCCGGTCTCTCGGCGTT CCACGACCACGAAGTGAAGAACGTGATGCAGCCTCACAATCCCGGGCCGCTTAAAGAGTTCTTGGTTCGGGTGTCAAAGA TTCAGTCCGTTGAGGAGGTGCACCGGGAGCAGAATCCCGATTACCAAAATCGAGTCCGCGTTTCTATCGTAACTGCACGT AATGCCCCCTCCCACGAGCGCGCACTTAAAACTCTTAAAAGTTGGGGCGTCATGGCAAACGATGCATTCTTTCTCGGCGG AATTGAGAAGGGCAAGGTCCTCGGAGTGCTGAAGCCGCACATCTTCTTCGATGACCAGTCTGGCCATCTGGAGTCGGCAA GCGCGGTTGCCCCTTCGGTTCACATTCCCTTCGGCGTCACAAATCAGCCGAAGCTCGGTGGTGAGTCGCCTGCAGTCTAA
Upstream 100 bases:
>100_bases TCGGCCGCTCACTGCCTGACAACTCTTCGAGCCGAAGAGTGCTTTGCAACTCGGTTTAATTCAGGCGTTAGGCGGTAGGA CGGATCTTTGAGGGGGATTG
Downstream 100 bases:
>100_bases CAACTCATGTACGGACTCCCATTGCAATAGCGCACAGCGTGAGCGTCGATGGGCGAAGCGGATCGGTTGCAGTCGTATAG ACGGCCTTGGGTTGCGCATT
Product: putative 5'-nucleotidase
Products: NA
Alternate protein names: 5-Nucleotidase 1A; 5-Nucleotidase Superfamily; 5 Nucleotidase; Uroporphyrin-III C-Methyltransferase-Like; 5-Nucleotidase Family Protein; 5-Nucleotidase Protein; 5-Nucleotidase Superfamily Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPYELKDRLVIGVASSAVFDLRHSDAVFRSQGEEQYRKYQEENLGSPLPKGIAFPFIKRLLALNDLSPDPTDPLVEVVLL SRNDPDTGLRVMKTIEHYGLGMTRAIFMQGRSPYEYIPALNIALFLSGHKPDVEAAIGLGHPAGQVLDSEFDDDEDDKTL RIAFDFDGVLAGDESESVMQASGLSAFHDHEVKNVMQPHNPGPLKEFLVRVSKIQSVEEVHREQNPDYQNRVRVSIVTAR NAPSHERALKTLKSWGVMANDAFFLGGIEKGKVLGVLKPHIFFDDQSGHLESASAVAPSVHIPFGVTNQPKLGGESPAV
Sequences:
>Translated_319_residues MPYELKDRLVIGVASSAVFDLRHSDAVFRSQGEEQYRKYQEENLGSPLPKGIAFPFIKRLLALNDLSPDPTDPLVEVVLL SRNDPDTGLRVMKTIEHYGLGMTRAIFMQGRSPYEYIPALNIALFLSGHKPDVEAAIGLGHPAGQVLDSEFDDDEDDKTL RIAFDFDGVLAGDESESVMQASGLSAFHDHEVKNVMQPHNPGPLKEFLVRVSKIQSVEEVHREQNPDYQNRVRVSIVTAR NAPSHERALKTLKSWGVMANDAFFLGGIEKGKVLGVLKPHIFFDDQSGHLESASAVAPSVHIPFGVTNQPKLGGESPAV >Mature_318_residues PYELKDRLVIGVASSAVFDLRHSDAVFRSQGEEQYRKYQEENLGSPLPKGIAFPFIKRLLALNDLSPDPTDPLVEVVLLS RNDPDTGLRVMKTIEHYGLGMTRAIFMQGRSPYEYIPALNIALFLSGHKPDVEAAIGLGHPAGQVLDSEFDDDEDDKTLR IAFDFDGVLAGDESESVMQASGLSAFHDHEVKNVMQPHNPGPLKEFLVRVSKIQSVEEVHREQNPDYQNRVRVSIVTARN APSHERALKTLKSWGVMANDAFFLGGIEKGKVLGVLKPHIFFDDQSGHLESASAVAPSVHIPFGVTNQPKLGGESPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14210538, Length=314, Percent_Identity=36.9426751592357, Blast_Score=194, Evalue=7e-50, Organism=Homo sapiens, GI50593110, Length=298, Percent_Identity=34.2281879194631, Blast_Score=166, Evalue=2e-41, Organism=Homo sapiens, GI50593108, Length=298, Percent_Identity=34.2281879194631, Blast_Score=166, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35131; Mature: 35000
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYELKDRLVIGVASSAVFDLRHSDAVFRSQGEEQYRKYQEENLGSPLPKGIAFPFIKRL CCCCCCCCEEEEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LALNDLSPDPTDPLVEVVLLSRNDPDTGLRVMKTIEHYGLGMTRAIFMQGRSPYEYIPAL HHHHCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCC NIALFLSGHKPDVEAAIGLGHPAGQVLDSEFDDDEDDKTLRIAFDFDGVLAGDESESVMQ EEEEEEECCCCCCHHEEECCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHH ASGLSAFHDHEVKNVMQPHNPGPLKEFLVRVSKIQSVEEVHREQNPDYQNRVRVSIVTAR HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEEC NAPSHERALKTLKSWGVMANDAFFLGGIEKGKVLGVLKPHIFFDDQSGHLESASAVAPSV CCCHHHHHHHHHHHCCCEECCEEEECCCCCCCEEEEECCEEEEECCCCCCCCHHHCCCCE HIPFGVTNQPKLGGESPAV ECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYELKDRLVIGVASSAVFDLRHSDAVFRSQGEEQYRKYQEENLGSPLPKGIAFPFIKRL CCCCCCCEEEEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LALNDLSPDPTDPLVEVVLLSRNDPDTGLRVMKTIEHYGLGMTRAIFMQGRSPYEYIPAL HHHHCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCC NIALFLSGHKPDVEAAIGLGHPAGQVLDSEFDDDEDDKTLRIAFDFDGVLAGDESESVMQ EEEEEEECCCCCCHHEEECCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHH ASGLSAFHDHEVKNVMQPHNPGPLKEFLVRVSKIQSVEEVHREQNPDYQNRVRVSIVTAR HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEEC NAPSHERALKTLKSWGVMANDAFFLGGIEKGKVLGVLKPHIFFDDQSGHLESASAVAPSV CCCHHHHHHHHHHHCCCEECCEEEECCCCCCCEEEEECCEEEEECCCCCCCCHHHCCCCE HIPFGVTNQPKLGGESPAV ECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA