| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 84625696
GI number: 84625696
Start: 4554038
End: 4555111
Strand: Reverse
Name: aroG [H]
Synonym: XOO_4039
Alternate gene names: 84625696
Gene position: 4555111-4554038 (Counterclockwise)
Preceding gene: 84625697
Following gene: 84625695
Centisome position: 92.2
GC content: 64.9
Gene sequence:
>1074_bases ATGCCGCCTGTGACCGATGACCTGCGTATCCGCAAGATCGAAGCCCTCGCACCGCCTTCGCAGCTGCTGTCGCTGCTGCC CTGCGATGAGCGCGCCTCCGAAACCGTGACCAACGCGCGCGCTGCGCTGCACAAGATCCTGCACGGGCGCGACGACCGCC TGGCGGTGGTGATCGGGCCCTGCTCGATCCACGACCCGGTGGCGGCGATGGAGTACGCGCAGCGCCTGCGCCCATTGCGT GACCAATTCGGCGACGCGCTGGAGATCGTGATGCGGGTGTACTTCGAAAAGCCGCGCACCACCATCGGCTGGAAGGGCCT GATCAACGACCCGGATCTGGATGGCAGCTTCCAGATCAACAAAGGCCTACGCGTAGCGCGCGGCTTGCTGCGCGACATCA ACAATCTCGGCTTGCCGGCCGGCGTGGAATTTCTCGACATCATTTCGCCGCAATACATCGCCGATCTGGTGGCCTGGGGC GCGATCGGTGCCCGCACCACCGAGAGCCAGGTGCATCGCGAAATGGCGTCCGGCCTGTCGTGCCCGGTGGGCTTCAAGAA CGGCACCAGCGGCGACGTCAAGATTGCGGTGGACGCGGTAGGCGCGGCCTCGCATCCGCATCATTTCCTGGCCGTGACCA AGGACGGACATACCGCCGTGGCAGCCACGGCAGGCAATCCGGATTGCCACGTGATTCTGCGCGGCGGCAAGCAGCCCAAC TTCGATGCAGCCAATGTGGAAGCGGCCAGCCAGGTGCTCAACAAGTCGGGCTTGCCGGCGCGCCTGATGATCGATGCCAG CCACGCCAACAGCAGCAAGAACCCCGAGAACCAGCCCAAGGTCATCGACGACATCAGCAATCAGCTGGAAGCAGGCGAAA CGCGCATCGTTGGCGTGATGGTGGAAAGTCACCTTGTCGGAGGGCGCCAGGAATTGCTGCCGGGTTGCGCGCTGACCTAC GGGCAGAGCATCACCGATGGCTGCATCGGTTGGGATACGTCGGTGCAGGTGCTGGAACGTCTGGCGACAGCAGTGCGCGC GCGGCGTGCGCGACGGATTGCCGAGGCTGCGTGA
Upstream 100 bases:
>100_bases TTCAGCAGCATTCCCAAAAAGCCGCCAGCGCACACTGGCGGCTTTTTTGTTGCCGCCTTGCCTGGCTCCCCGATGCAACA CCGCCCACCGAGACACTGTT
Downstream 100 bases:
>100_bases GTCATGGACTGCAGCATCAGCGGTGGCAACGCGTGCTGATGCTGCATGGCGCATCGCCAACGGCGAGCTATGACGGGGCA ACGCGCTGGCTGGCGTGCAA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPPVTDDLRIRKIEALAPPSQLLSLLPCDERASETVTNARAALHKILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLR DQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWG AIGARTTESQVHREMASGLSCPVGFKNGTSGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN FDAANVEAASQVLNKSGLPARLMIDASHANSSKNPENQPKVIDDISNQLEAGETRIVGVMVESHLVGGRQELLPGCALTY GQSITDGCIGWDTSVQVLERLATAVRARRARRIAEAA
Sequences:
>Translated_357_residues MPPVTDDLRIRKIEALAPPSQLLSLLPCDERASETVTNARAALHKILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLR DQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWG AIGARTTESQVHREMASGLSCPVGFKNGTSGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN FDAANVEAASQVLNKSGLPARLMIDASHANSSKNPENQPKVIDDISNQLEAGETRIVGVMVESHLVGGRQELLPGCALTY GQSITDGCIGWDTSVQVLERLATAVRARRARRIAEAA >Mature_356_residues PPVTDDLRIRKIEALAPPSQLLSLLPCDERASETVTNARAALHKILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLRD QFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGA IGARTTESQVHREMASGLSCPVGFKNGTSGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPNF DAANVEAASQVLNKSGLPARLMIDASHANSSKNPENQPKVIDDISNQLEAGETRIVGVMVESHLVGGRQELLPGCALTYG QSITDGCIGWDTSVQVLERLATAVRARRARRIAEAA
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=64.4699140401146, Blast_Score=468, Evalue=1e-133, Organism=Escherichia coli, GI1787996, Length=344, Percent_Identity=53.4883720930233, Blast_Score=390, Evalue=1e-110, Organism=Escherichia coli, GI1788953, Length=350, Percent_Identity=46.8571428571429, Blast_Score=344, Evalue=6e-96, Organism=Saccharomyces cerevisiae, GI6319726, Length=360, Percent_Identity=53.8888888888889, Blast_Score=366, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320240, Length=352, Percent_Identity=51.4204545454545, Blast_Score=361, Evalue=1e-101,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38289; Mature: 38158
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVTDDLRIRKIEALAPPSQLLSLLPCDERASETVTNARAALHKILHGRDDRLAVVIGP CCCCCCCHHEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC CSIHDPVAAMEYAQRLRPLRDQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGAIGARTTESQVHREMASGLS CCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPVGFKNGTSGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC FDAANVEAASQVLNKSGLPARLMIDASHANSSKNPENQPKVIDDISNQLEAGETRIVGVM CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE VESHLVGGRQELLPGCALTYGQSITDGCIGWDTSVQVLERLATAVRARRARRIAEAA EHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPVTDDLRIRKIEALAPPSQLLSLLPCDERASETVTNARAALHKILHGRDDRLAVVIGP CCCCCCHHEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC CSIHDPVAAMEYAQRLRPLRDQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGAIGARTTESQVHREMASGLS CCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPVGFKNGTSGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC FDAANVEAASQVLNKSGLPARLMIDASHANSSKNPENQPKVIDDISNQLEAGETRIVGVM CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE VESHLVGGRQELLPGCALTYGQSITDGCIGWDTSVQVLERLATAVRARRARRIAEAA EHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]