| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625695
Identifier: 84625695
GI number: 84625695
Start: 4552069
End: 4553595
Strand: Reverse
Name: 84625695
Synonym: XOO_4038
Alternate gene names: NA
Gene position: 4553595-4552069 (Counterclockwise)
Preceding gene: 84625696
Following gene: 84625693
Centisome position: 92.17
GC content: 66.01
Gene sequence:
>1527_bases ATGCAAGCTTGCAATAGCGATTGGCCGCTTGCCGATCGCCAAGCTCTACCGCCACCCCCAATCCCCATGACGGCAATGGC CGTATTCACGCGTCGCGGTCGGCACAACCGCGATAGTGACGGCAGACTCTTTCCTGCCTGTGCCCATGCCCTCACTTCGC GACCGCTTCCAGCGCTGGCCACGGCCGTGGCGTCGTGCAGTGGTCGCGGTGCTTGCGTTGTACGCACTGTACCTGCTGGC CGGCAACCTCTATCTCAACACCCCGCTGTTCGACGCCAGCACCAACCGGCAGCCGCACACGTTCACCATGCAGACCGGCC CGGCGCTGACGCTGTTCCCGGGCGAGGTCATCGCCTTCAACGTGCGCATGCGCGGGCAGGCCAATCGCACCGTGTATGTC TCCATGCCGACCGCGCGCATGCACGTATTGCTCTGCTGGCCTTGTTTCGGCGCGAAGTCCGTTTGCCTTGGCTGCACGCC ACCGGGGTGAGCGCGGAAGTGGATACATCCGATACGCCGATTCCACCGCCGTCGCGTGGCGACCAGGGCTGGACCTTGCG CTTTGATGCGATCACCAGCAACAGCATCCGCAGCGCGCGTCTGGGCAAATTGCTGATCGCCGGGCAGGGGCACGGCAAGA TCGGCTTTCTGAAGCAACTCAAGGGCGGGCCATCTGCGCTGTTTCCTTCCGAAGCGGGCTTTACCGATGCGGTGGTCAGC TACGACGGGGTGCAGGTGTTCAACGGCGCGCAGCTGGATGCGCAGTTCCAGTTTCCACGCCATTACCGCGACCAAGCACC CGGCTTGCGCAAGCTCGGCATCACCAGAGCGCGGCTGCAGTTGAAGGCCAATACGGTGGCGTTGAAGATCGATACCGGCG CGCCGCACGTGGACGTCAGTAGCGGACCATCGGCAGCCCGCGTGGAGGCCGATATTCGCCTGGACGGTGGCGCGCTACAG CCGGGCAGCCGTGCGGTGTGGAGGCTGCCGCTGCTGGCCGGCGTCGGTGCCACCGATCGCGGCATGCTCGCGTTGCAACT GGACGTGGCCCAGGAGAGCCGCGTGCAGGCGCGGCTGCCGCGCGATGAGAAGACCGGCAGCGAACTGCACGCCGACCTGC GCATCGCCGGGCGCAGCGTTCCGCTCGAACAGCCGGCACAGTTGCTGCCGCGCATGTCGGGGCAGATGCGCGGGCTTTGG AAGTTCGAATCCTTGAACTGGATTGCCGAGCTGTTCGTGCGCAAGCCGTGGTTTCAGCTGGAAGCCGGCGGTCTGGTCGA GGCGGACCTGCGCCTTGCACAGGGGCGGCTCACTAGCGGCAGCACGCTGGATATTGCGCGCGTGGAAGCGGTGGCGCAGG TGTTCGACACGCGACTGGCCGGTATCGCCAAGGCGCACGGTCGCATCGACGATGCGGCGACCCCGCAGGCGCATCTGGAC GTGAGCATTCCCACCTTCAAGGCGGCGCCGCGCGATGCGCCCAAACAACTCCTGCTGGAGGGCCGCGATCTGCAACTGGC CACCTGA
Upstream 100 bases:
>100_bases CGCTGCATGTCGGCGGCAGCAATGAAGTTTGAGAAGCGTTAAAACTACGGCCTGTTGATGCCGAGCCTTCAGCACAACCC CAGTGCACGCACCCAACGGG
Downstream 100 bases:
>100_bases TTAGCACGCACTTTCAGCGGTGAACAGGGTGACATCACGCAGGGCCCGCTCGGACCACGGCTTGCTGGCGGCTGCGGCGG CCAGCAAGCTGGGCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MQACNSDWPLADRQALPPPPIPMTAMAVFTRRGRHNRDSDGRLFPACAHALTSRPLPALATAVASCSGRGACVVRTVPAG RQPLSQHPAVRRQHQPAAAHVHHADRPGADAVPGRGHRLQRAHARAGQSHRVCLHADRAHARIALLALFRREVRLPWLHA TGVSAEVDTSDTPIPPPSRGDQGWTLRFDAITSNSIRSARLGKLLIAGQGHGKIGFLKQLKGGPSALFPSEAGFTDAVVS YDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITRARLQLKANTVALKIDTGAPHVDVSSGPSAARVEADIRLDGGALQ PGSRAVWRLPLLAGVGATDRGMLALQLDVAQESRVQARLPRDEKTGSELHADLRIAGRSVPLEQPAQLLPRMSGQMRGLW KFESLNWIAELFVRKPWFQLEAGGLVEADLRLAQGRLTSGSTLDIARVEAVAQVFDTRLAGIAKAHGRIDDAATPQAHLD VSIPTFKAAPRDAPKQLLLEGRDLQLAT
Sequences:
>Translated_508_residues MQACNSDWPLADRQALPPPPIPMTAMAVFTRRGRHNRDSDGRLFPACAHALTSRPLPALATAVASCSGRGACVVRTVPAG RQPLSQHPAVRRQHQPAAAHVHHADRPGADAVPGRGHRLQRAHARAGQSHRVCLHADRAHARIALLALFRREVRLPWLHA TGVSAEVDTSDTPIPPPSRGDQGWTLRFDAITSNSIRSARLGKLLIAGQGHGKIGFLKQLKGGPSALFPSEAGFTDAVVS YDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITRARLQLKANTVALKIDTGAPHVDVSSGPSAARVEADIRLDGGALQ PGSRAVWRLPLLAGVGATDRGMLALQLDVAQESRVQARLPRDEKTGSELHADLRIAGRSVPLEQPAQLLPRMSGQMRGLW KFESLNWIAELFVRKPWFQLEAGGLVEADLRLAQGRLTSGSTLDIARVEAVAQVFDTRLAGIAKAHGRIDDAATPQAHLD VSIPTFKAAPRDAPKQLLLEGRDLQLAT >Mature_508_residues MQACNSDWPLADRQALPPPPIPMTAMAVFTRRGRHNRDSDGRLFPACAHALTSRPLPALATAVASCSGRGACVVRTVPAG RQPLSQHPAVRRQHQPAAAHVHHADRPGADAVPGRGHRLQRAHARAGQSHRVCLHADRAHARIALLALFRREVRLPWLHA TGVSAEVDTSDTPIPPPSRGDQGWTLRFDAITSNSIRSARLGKLLIAGQGHGKIGFLKQLKGGPSALFPSEAGFTDAVVS YDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITRARLQLKANTVALKIDTGAPHVDVSSGPSAARVEADIRLDGGALQ PGSRAVWRLPLLAGVGATDRGMLALQLDVAQESRVQARLPRDEKTGSELHADLRIAGRSVPLEQPAQLLPRMSGQMRGLW KFESLNWIAELFVRKPWFQLEAGGLVEADLRLAQGRLTSGSTLDIARVEAVAQVFDTRLAGIAKAHGRIDDAATPQAHLD VSIPTFKAAPRDAPKQLLLEGRDLQLAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54759; Mature: 54759
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQACNSDWPLADRQALPPPPIPMTAMAVFTRRGRHNRDSDGRLFPACAHALTSRPLPALA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHH TAVASCSGRGACVVRTVPAGRQPLSQHPAVRRQHQPAAAHVHHADRPGADAVPGRGHRLQ HHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHH RAHARAGQSHRVCLHADRAHARIALLALFRREVRLPWLHATGVSAEVDTSDTPIPPPSRG HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCCC DQGWTLRFDAITSNSIRSARLGKLLIAGQGHGKIGFLKQLKGGPSALFPSEAGFTDAVVS CCCEEEEEEEECCCCCCHHCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHEEE YDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITRARLQLKANTVALKIDTGAPHVDVS CCCEEEECCCEECEEECCCHHHHHCCCCHHHHCCEEEEEEEEEEEEEEEEECCCCEEECC SGPSAARVEADIRLDGGALQPGSRAVWRLPLLAGVGATDRGMLALQLDVAQESRVQARLP CCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCHHHHCCC RDEKTGSELHADLRIAGRSVPLEQPAQLLPRMSGQMRGLWKFESLNWIAELFVRKPWFQL CCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEE EAGGLVEADLRLAQGRLTSGSTLDIARVEAVAQVFDTRLAGIAKAHGRIDDAATPQAHLD CCCCEEHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE VSIPTFKAAPRDAPKQLLLEGRDLQLAT EECCCCCCCCCCCCHHHHHCCCCEEECC >Mature Secondary Structure MQACNSDWPLADRQALPPPPIPMTAMAVFTRRGRHNRDSDGRLFPACAHALTSRPLPALA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHH TAVASCSGRGACVVRTVPAGRQPLSQHPAVRRQHQPAAAHVHHADRPGADAVPGRGHRLQ HHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHH RAHARAGQSHRVCLHADRAHARIALLALFRREVRLPWLHATGVSAEVDTSDTPIPPPSRG HHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCCC DQGWTLRFDAITSNSIRSARLGKLLIAGQGHGKIGFLKQLKGGPSALFPSEAGFTDAVVS CCCEEEEEEEECCCCCCHHCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCHHEEE YDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITRARLQLKANTVALKIDTGAPHVDVS CCCEEEECCCEECEEECCCHHHHHCCCCHHHHCCEEEEEEEEEEEEEEEEECCCCEEECC SGPSAARVEADIRLDGGALQPGSRAVWRLPLLAGVGATDRGMLALQLDVAQESRVQARLP CCCCCEEEEEEEEECCCCCCCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCHHHHCCC RDEKTGSELHADLRIAGRSVPLEQPAQLLPRMSGQMRGLWKFESLNWIAELFVRKPWFQL CCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEE EAGGLVEADLRLAQGRLTSGSTLDIARVEAVAQVFDTRLAGIAKAHGRIDDAATPQAHLD CCCCEEHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE VSIPTFKAAPRDAPKQLLLEGRDLQLAT EECCCCCCCCCCCCHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA