| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625675
Identifier: 84625675
GI number: 84625675
Start: 4532065
End: 4532511
Strand: Reverse
Name: 84625675
Synonym: XOO_4018
Alternate gene names: NA
Gene position: 4532511-4532065 (Counterclockwise)
Preceding gene: 84625679
Following gene: 84625674
Centisome position: 91.75
GC content: 62.86
Gene sequence:
>447_bases TTGGCCGCCCACCCGCCACGGAGGCCGGCCTTGCGCCAGATTCTGACCCCAAGCCTGCTGGCCCTTTTGCTTACAGCCTG TAACTCCCCGGAGACCAGCATGACCCAGACCCACTCCCCCGCCACCGAGGCCACCGCAGAAGCCGACGTCGAGGCCGGAG GCCGCGGTCTTGCCAAGTTAAATCCGAGCCCGCGTAAGGCTTACGAGGTCGCGCTCACCCTGAACAAGGCGCCTGGCGCT TTCGGTCTGGTGGAAGCTGCGGCGCAATACGATGTCAGCAACGAGCAGCAGTGCGGCAAGATCCAGCCCGAAACCGGCAC CGCCGGCCGCATAACCAGCCAGGAAAATGTCGTGCTCAAGAAGATTTCCGAGACCGAATACCGCGGCACCGTGTATCTGG ATCTGATGCAGGACGAGGACTATTACGGTCGCGGCGTCTGCTATTGA
Upstream 100 bases:
>100_bases GCAGCTGGTCTGATGATCGCAGCTTTGCTGTCATGTACAACTGGTATGGCAGGCGCATCCTCACGCAGCTTCGATTGACC CCTCGAACGCGCGCACTAGA
Downstream 100 bases:
>100_bases GAATTCAGCGGCGTCAGCGTGCTGCTCAAGGCCACCGATGCCGAAGAAGAAACGCGGTTCTTGTCGTTTGTCGAAGCCAA GACGGTGACCGCGCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAAHPPRRPALRQILTPSLLALLLTACNSPETSMTQTHSPATEATAEADVEAGGRGLAKLNPSPRKAYEVALTLNKAPGA FGLVEAAAQYDVSNEQQCGKIQPETGTAGRITSQENVVLKKISETEYRGTVYLDLMQDEDYYGRGVCY
Sequences:
>Translated_148_residues MAAHPPRRPALRQILTPSLLALLLTACNSPETSMTQTHSPATEATAEADVEAGGRGLAKLNPSPRKAYEVALTLNKAPGA FGLVEAAAQYDVSNEQQCGKIQPETGTAGRITSQENVVLKKISETEYRGTVYLDLMQDEDYYGRGVCY >Mature_147_residues AAHPPRRPALRQILTPSLLALLLTACNSPETSMTQTHSPATEATAEADVEAGGRGLAKLNPSPRKAYEVALTLNKAPGAF GLVEAAAQYDVSNEQQCGKIQPETGTAGRITSQENVVLKKISETEYRGTVYLDLMQDEDYYGRGVCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15927; Mature: 15796
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHPPRRPALRQILTPSLLALLLTACNSPETSMTQTHSPATEATAEADVEAGGRGLAKL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPSPRKAYEVALTLNKAPGAFGLVEAAAQYDVSNEQQCGKIQPETGTAGRITSQENVVLK CCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KISETEYRGTVYLDLMQDEDYYGRGVCY HHCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure AAHPPRRPALRQILTPSLLALLLTACNSPETSMTQTHSPATEATAEADVEAGGRGLAKL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPSPRKAYEVALTLNKAPGAFGLVEAAAQYDVSNEQQCGKIQPETGTAGRITSQENVVLK CCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KISETEYRGTVYLDLMQDEDYYGRGVCY HHCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA