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The map label for this gene is insF1 [C]

Identifier: 84625674

GI number: 84625674

Start: 4531044

End: 4531556

Strand: Reverse

Name: insF1 [C]

Synonym: XOO_4017

Alternate gene names: 84625674

Gene position: 4531556-4531044 (Counterclockwise)

Preceding gene: 84625675

Following gene: 84625670

Centisome position: 91.73

GC content: 62.96

Gene sequence:

>513_bases
GTGAAGCGCTTCATCGACGACCATCGCGACGTTCACGGGGTCGAGCCGATCTGCAAGGTGTTGCCGATCGCCCCGTCGAC
GTACTACGCGCACGCGGCCCGAAGGTCCGATCCTGAGTTGCGCTCGGCAAGGGCCAAGACGGACGAGGCGTTGATGCCTG
AAATCAGGCGTGTGTGGGACGAGAACTTCCAGGTCTATGGTGTGCGTCAGCTCTGGCGGCAGATGCGGCGGGAGCAGTTC
GCTGTTGCGCGCTGCACCGTGCAGCGTCTGATGAAGCGCCAGGGCCTGCGCGGTGTCATCCGCGGCAAGGCGGTGCGCAC
GACGGTGAGCGATGCGAAGGCGCCGTGCCCGCTCGATCACGTCAACAGGCAGTTCACTTCGGATCGGCCAAACGCGTTGT
GGGTCTCGGACTTCACCGATGTGTCGACGTGGCAAGGCTGGATCTACGTAGTCGCCCCTGAAAAACCCCTCTCAAACCTC
CAGTACCATGTTTGCCGGCCACATGGTGCTTGA

Upstream 100 bases:

>100_bases
GCATCAGATTGCTTGAGCGCCAGCTGCGCCTGGCCGACGAGATCCTGCGCAAGGCGTCGGCGTCTTTTGCCCAGGCGGAA
CTCGACCGCCCCTTCACGAG

Downstream 100 bases:

>100_bases
GGGCGTTGAGGAACGCGCCCGCGCCACCTGCAACCAGGCACGCAAAAAGGCGATCCAGCGCAGCAGCCACCGCAGGTTGT
CGCCAGCGGCGCAGCCGAGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWDENFQVYGVRQLWRQMRREQF
AVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDHVNRQFTSDRPNALWVSDFTDVSTWQGWIYVVAPEKPLSNL
QYHVCRPHGA

Sequences:

>Translated_170_residues
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWDENFQVYGVRQLWRQMRREQF
AVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDHVNRQFTSDRPNALWVSDFTDVSTWQGWIYVVAPEKPLSNL
QYHVCRPHGA
>Mature_170_residues
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWDENFQVYGVRQLWRQMRREQF
AVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDHVNRQFTSDRPNALWVSDFTDVSTWQGWIYVVAPEKPLSNL
QYHVCRPHGA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=150, Percent_Identity=45.3333333333333, Blast_Score=142, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19753; Mature: 19753

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWD
CCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHC
ENFQVYGVRQLWRQMRREQFAVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDH
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEHHCCCCCCCHHH
VNRQFTSDRPNALWVSDFTDVSTWQGWIYVVAPEKPLSNLQYHVCRPHGA
HHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MKRFIDDHRDVHGVEPICKVLPIAPSTYYAHAARRSDPELRSARAKTDEALMPEIRRVWD
CCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHC
ENFQVYGVRQLWRQMRREQFAVARCTVQRLMKRQGLRGVIRGKAVRTTVSDAKAPCPLDH
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEHHCCCCCCCHHH
VNRQFTSDRPNALWVSDFTDVSTWQGWIYVVAPEKPLSNLQYHVCRPHGA
HHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]