| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yeiW [H]
Identifier: 84625652
GI number: 84625652
Start: 4503228
End: 4503494
Strand: Reverse
Name: yeiW [H]
Synonym: XOO_3995
Alternate gene names: 84625652
Gene position: 4503494-4503228 (Counterclockwise)
Preceding gene: 84625654
Following gene: 84625648
Centisome position: 91.16
GC content: 68.16
Gene sequence:
>267_bases ATGTCTTCGCCACTTTCCTGCCGCCTGGGTTGCGCAGCCTGCTGCATCGCGCCCTCGATCAGTTCGCCGATTCCCGGCAT GCCCAACGGCAAGCCAGCCGGCGTGGCGTGCGTGCAGCTGGATGCGCAGCTGGGCTGCCGGTTGTTCGGTTCGCCGCTGC GTCCGGCGGTGTGCGGCAACCTGCGGCCGTCGCTGGAGATGTGTGGGACATCGCGTAAGCAGGCGCTCTCCATGCTCGCC GCATTGGAGCGCGCGACACAGCCCTGA
Upstream 100 bases:
>100_bases GCGCGTGCGTTCCGGTGGCCGGGCTCGTTGGCACGCGGTGCAATGCGCGGCGGCGGTGACGATCGGGCGAGACCACCCGC GGCACCGCTACACTCGCGCC
Downstream 100 bases:
>100_bases GCGGCGGCGCGCGCACTGTCGGCGATCAGCTGCCGCCGGGCACGCCCAGGTACTGATCCTTGAGCCGCACATAATGTTGC GCGGAGTAATGCAGGCTTTC
Product: proteinase inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSSPLSCRLGCAACCIAPSISSPIPGMPNGKPAGVACVQLDAQLGCRLFGSPLRPAVCGNLRPSLEMCGTSRKQALSMLA ALERATQP
Sequences:
>Translated_88_residues MSSPLSCRLGCAACCIAPSISSPIPGMPNGKPAGVACVQLDAQLGCRLFGSPLRPAVCGNLRPSLEMCGTSRKQALSMLA ALERATQP >Mature_87_residues SSPLSCRLGCAACCIAPSISSPIPGMPNGKPAGVACVQLDAQLGCRLFGSPLRPAVCGNLRPSLEMCGTSRKQALSMLAA LERATQP
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=84, Percent_Identity=61.9047619047619, Blast_Score=108, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 8987; Mature: 8856
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 9.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 12.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLSCRLGCAACCIAPSISSPIPGMPNGKPAGVACVQLDAQLGCRLFGSPLRPAVCGN CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHCHHHCCCCCCCHHCCC LRPSLEMCGTSRKQALSMLAALERATQP CCCCHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSPLSCRLGCAACCIAPSISSPIPGMPNGKPAGVACVQLDAQLGCRLFGSPLRPAVCGN CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHCHHHCCCCCCCHHCCC LRPSLEMCGTSRKQALSMLAALERATQP CCCCHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]