| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625625
Identifier: 84625625
GI number: 84625625
Start: 4471962
End: 4472558
Strand: Reverse
Name: 84625625
Synonym: XOO_3968
Alternate gene names: NA
Gene position: 4472558-4471962 (Counterclockwise)
Preceding gene: 84625632
Following gene: 84625619
Centisome position: 90.53
GC content: 59.97
Gene sequence:
>597_bases ATGAAGACTTCTTTGCTGGCCCTCGGCCTTCTCGCAGCGCTGCCGTTTGCGGCCTCCGCTGCTGAAAACCTCTCCTACAA CTTCGTCGAAGGCGACTACGTGCGCACGCCGACCGACGGCCGCGATGCGGACGGCTGGGGCGTGAAGGCATCTTATGCTG TTGCTCCGAACTTCCACGTGTTCGGCGAGTACAGCAAGCAGAACGCTGACGACAACAAAAACCTGTTCGAGAACACCAAC TCCGACTTCCAGCAGTGGGGCGTTGGCGTGGGCTTCAACCACGAAATCGCCACCAGCACGGACTTCGTTGCCCGCGTTGC GTACCGCAGGCTGGACCTGGACAGCCCGAACATCAACTTCGACGGCTACAGCGTTGAAGCCGGTCTGCGTAACGCCTTCG GTGAGCACTTCGAAGTCTACGCACTGGCTGGTTACGAAGACTACTCCAAGAAGCGTGGCATCGACGCCGGTAACGACTTC TACGGCCGCCTTGGCGCCCAGGTGAAGTTGAACCAGAACTGGGGCATCAACGGCGACATCCGTATGGATGGCGACGGCAA CAAGGAATGGTCGGTCGGCCCGCGCTTCAGCTGGTAA
Upstream 100 bases:
>100_bases TCATGTCGCGTTCCATCGAATAACGGAGAATTTACATCTCGGCAGCGAACGGCATTCGCCCCAGCGCCGGTCCAATCAAA TAAGTACAGGTATCCCAATC
Downstream 100 bases:
>100_bases GCCGCACGTTTAACTGCAAGGCGACTCTCTCTCCAGCGTTGCATTGGAAGCCCGGTCCACCGACCGGGTTTCTTTCTTTT GGGCGATCGTTTGGCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTDGRDADGWGVKASYAVAPNFHVFGEYSKQNADDNKNLFENTN SDFQQWGVGVGFNHEIATSTDFVARVAYRRLDLDSPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDYSKKRGIDAGNDF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW
Sequences:
>Translated_198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTDGRDADGWGVKASYAVAPNFHVFGEYSKQNADDNKNLFENTN SDFQQWGVGVGFNHEIATSTDFVARVAYRRLDLDSPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDYSKKRGIDAGNDF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW >Mature_198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTDGRDADGWGVKASYAVAPNFHVFGEYSKQNADDNKNLFENTN SDFQQWGVGVGFNHEIATSTDFVARVAYRRLDLDSPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDYSKKRGIDAGNDF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21907; Mature: 21907
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTDGRDADGWGVKASYAVAPNFHV CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCEEEEEECCCEEE FGEYSKQNADDNKNLFENTNSDFQQWGVGVGFNHEIATSTDFVARVAYRRLDLDSPNINF EECCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DGYSVEAGLRNAFGEHFEVYALAGYEDYSKKRGIDAGNDFYGRLGAQVKLNQNWGINGDI CCEEECHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCHHCCCCCEEEECCCCCCCCEE RMDGDGNKEWSVGPRFSW EECCCCCCCCCCCCCCCC >Mature Secondary Structure MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTDGRDADGWGVKASYAVAPNFHV CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCEEEEEECCCEEE FGEYSKQNADDNKNLFENTNSDFQQWGVGVGFNHEIATSTDFVARVAYRRLDLDSPNINF EECCCCCCCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DGYSVEAGLRNAFGEHFEVYALAGYEDYSKKRGIDAGNDFYGRLGAQVKLNQNWGINGDI CCEEECHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCHHCCCCCEEEECCCCCCCCEE RMDGDGNKEWSVGPRFSW EECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA