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The map label for this gene is lemA [H]

Identifier: 84625204

GI number: 84625204

Start: 4007631

End: 4008269

Strand: Reverse

Name: lemA [H]

Synonym: XOO_3547

Alternate gene names: 84625204

Gene position: 4008269-4007631 (Counterclockwise)

Preceding gene: 84625205

Following gene: 84625203

Centisome position: 81.14

GC content: 59.78

Gene sequence:

>639_bases
ATGCCTGTCCTGATTCGCGGCCTGGTGTTGCTGATCCTGACTGCCACACTGTCCGGTTGCGGCTATAACGCGATTCAGCA
GAAGGAAGAAGGCGTCAAGGCCGGTTGGGCGGAAGTGCTCAATCAATATCAGCGCCGCGCCGATCTGATTCCCAATCTGG
TGCGCACTGTGCAGGGCTACGCCCAGCAAGAACGCCAGGTGCTGACCGAAGTGACCAATGCGCGCGCGCGCGTGGGCCAG
ATCCAGGTCAATGCCGATGACGAAGCGTCGTTGAAGCAATTCCAGCAGGCGCAAGGCGAGTTGGGGAGCGCTCTATCGCG
TTTGTTGGTGGTCAGCGAAAATTATCCGCAACTCAAGTCGGACCAATCGTTCCGCGATCTGCAGGTGCAGCTGGAAGGTA
CCGAAAACCGCATCACGGTGGCGCGCGGCCGCTATATCCAGACCGTGCAGGACTACAACACCTATATCCGTTCGTTCCCG
CAGGTCATCACGGCGAAGATCTTCGGATACCAGCCCAAGCCCAATTTCAGCGTAGAAAACGAAGCGCAGATCGCGCGCGC
CCCGCAGGTGGATTTCGGTCATCAGCAGGCGCCACAACAGACGCCGCAGCAACAGCCCGCGCCGCAGCCTGCGCAGTAA

Upstream 100 bases:

>100_bases
TCTGAGGCGACGGTGCGGGTGGCAAGCCGGCCAGAGGCGTGCATGCTGGCTTGACCTGATCCATGGCATGCTCGGGTTCT
CTTTCAACGGAATCGCCTGC

Downstream 100 bases:

>100_bases
TCAGCTGCTGTGGGTGAGCGGTGCCTGTGCAGTCGTCGGTAGCAAGCGCGGTCCGCGCGCTGTCCAAGCGCACCAAGGCA
ACGCACGCCGAGCAGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPVLIRGLVLLILTATLSGCGYNAIQQKEEGVKAGWAEVLNQYQRRADLIPNLVRTVQGYAQQERQVLTEVTNARARVGQ
IQVNADDEASLKQFQQAQGELGSALSRLLVVSENYPQLKSDQSFRDLQVQLEGTENRITVARGRYIQTVQDYNTYIRSFP
QVITAKIFGYQPKPNFSVENEAQIARAPQVDFGHQQAPQQTPQQQPAPQPAQ

Sequences:

>Translated_212_residues
MPVLIRGLVLLILTATLSGCGYNAIQQKEEGVKAGWAEVLNQYQRRADLIPNLVRTVQGYAQQERQVLTEVTNARARVGQ
IQVNADDEASLKQFQQAQGELGSALSRLLVVSENYPQLKSDQSFRDLQVQLEGTENRITVARGRYIQTVQDYNTYIRSFP
QVITAKIFGYQPKPNFSVENEAQIARAPQVDFGHQQAPQQTPQQQPAPQPAQ
>Mature_211_residues
PVLIRGLVLLILTATLSGCGYNAIQQKEEGVKAGWAEVLNQYQRRADLIPNLVRTVQGYAQQERQVLTEVTNARARVGQI
QVNADDEASLKQFQQAQGELGSALSRLLVVSENYPQLKSDQSFRDLQVQLEGTENRITVARGRYIQTVQDYNTYIRSFPQ
VITAKIFGYQPKPNFSVENEAQIARAPQVDFGHQQAPQQTPQQQPAPQPAQ

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 23735; Mature: 23604

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLIRGLVLLILTATLSGCGYNAIQQKEEGVKAGWAEVLNQYQRRADLIPNLVRTVQGY
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQQERQVLTEVTNARARVGQIQVNADDEASLKQFQQAQGELGSALSRLLVVSENYPQLKS
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQSFRDLQVQLEGTENRITVARGRYIQTVQDYNTYIRSFPQVITAKIFGYQPKPNFSVEN
CCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EAQIARAPQVDFGHQQAPQQTPQQQPAPQPAQ
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PVLIRGLVLLILTATLSGCGYNAIQQKEEGVKAGWAEVLNQYQRRADLIPNLVRTVQGY
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQQERQVLTEVTNARARVGQIQVNADDEASLKQFQQAQGELGSALSRLLVVSENYPQLKS
HHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQSFRDLQVQLEGTENRITVARGRYIQTVQDYNTYIRSFPQVITAKIFGYQPKPNFSVEN
CCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EAQIARAPQVDFGHQQAPQQTPQQQPAPQPAQ
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]