| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is ygcG [H]
Identifier: 84625203
GI number: 84625203
Start: 4006403
End: 4007260
Strand: Reverse
Name: ygcG [H]
Synonym: XOO_3546
Alternate gene names: 84625203
Gene position: 4007260-4006403 (Counterclockwise)
Preceding gene: 84625204
Following gene: 84625202
Centisome position: 81.12
GC content: 69.7
Gene sequence:
>858_bases ATGGCGTTGCTGTTGCTGCCGGCCTCGCTGTTGGCGCAGGAGTTGGCCGCCATCCCGCCGCTGCGGTCGCCGGTCGTCGA TGTCACCGGCACGCTGGATGCGGGGCAGATCCAGCAACTCGAACAACAGGCGCTGGCCTTGCAACAACGCAAGGGCGCGC AGTTGCAGATCCTGATCGTGCCGACCACGCAGCCCGAAGCGATCGAGCAATACACCCAGCGCGTGTTCGACCAGTGGAAG ATCGGCCGCAAGGGCGTGGACGACGGCGTGCTGCTGCTGGTGGCCAAGGACGACCGCCGCGTGCGCATCCAGCCGGGTTA CGGCCTGGAAGGTGCCATTGCCGACATCACGGCGAACCGCATCATCCAGGAGTATCTGGCGCCACGCTTCCGTGAGGGCG ATTACGCCGGCGGCATCAGTGCCGCAACCGCGACGTTGGCCGGCCTGATCGAGGGTGAGGCCTTGCCGCCGCCGGTCAGT GGACATGCCGATGGCGGCAACGGCGCGGGCGGCGGTGGCTGGATCATGGCGCTGTTCATCGGCTTCGTGGTGGCCATGGT CGCGCGCGGCATGCTAGGCGCGCTACCGCGCCCGCTGCGCGCCTTGCTGACCGGCGTTGCTGCTGGCGGCGCGGCATTGC TGTCTACGTCGTTGCTGTTCGCCAGCGCTGGCGCAGCGGTGATCGGATTGCTGGCGGGCCTTGCCTGTGGGTCGCCCGGG CGTTTCGTCGGTGGCGGCGGCTGGGGCGGTGGTGGGTTCGGTGGCTTTGGCGGCGGCCGTGGCGGTTTCGGCGGCGGTGG TGGCTGGGGCGGTGGCGGCGGGTCATCAGGAGGCGGTGGCGCCTCGGGGAGCTGGTAA
Upstream 100 bases:
>100_bases CCGTGAGAAGGAATAGCAAAAACCCAGCGCTGATCGACGATCAGCGCGCATCAGGCAGGAGTTGGCAATGCGGCGAACGT ATTTGAAAGTCGTGTGGATG
Downstream 100 bases:
>100_bases TGCGGTGGCTCAGGCATATTTTCGCGCCCTCGGCGCAGCGTCGTTTTCCAGCCGCGTGCATGGACGCCATCGCCGCGGCG GTCACTGCCAGCGAGCGCTC
Product: glycine rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MALLLLPASLLAQELAAIPPLRSPVVDVTGTLDAGQIQQLEQQALALQQRKGAQLQILIVPTTQPEAIEQYTQRVFDQWK IGRKGVDDGVLLLVAKDDRRVRIQPGYGLEGAIADITANRIIQEYLAPRFREGDYAGGISAATATLAGLIEGEALPPPVS GHADGGNGAGGGGWIMALFIGFVVAMVARGMLGALPRPLRALLTGVAAGGAALLSTSLLFASAGAAVIGLLAGLACGSPG RFVGGGGWGGGGFGGFGGGRGGFGGGGGWGGGGGSSGGGGASGSW
Sequences:
>Translated_285_residues MALLLLPASLLAQELAAIPPLRSPVVDVTGTLDAGQIQQLEQQALALQQRKGAQLQILIVPTTQPEAIEQYTQRVFDQWK IGRKGVDDGVLLLVAKDDRRVRIQPGYGLEGAIADITANRIIQEYLAPRFREGDYAGGISAATATLAGLIEGEALPPPVS GHADGGNGAGGGGWIMALFIGFVVAMVARGMLGALPRPLRALLTGVAAGGAALLSTSLLFASAGAAVIGLLAGLACGSPG RFVGGGGWGGGGFGGFGGGRGGFGGGGGWGGGGGSSGGGGASGSW >Mature_284_residues ALLLLPASLLAQELAAIPPLRSPVVDVTGTLDAGQIQQLEQQALALQQRKGAQLQILIVPTTQPEAIEQYTQRVFDQWKI GRKGVDDGVLLLVAKDDRRVRIQPGYGLEGAIADITANRIIQEYLAPRFREGDYAGGISAATATLAGLIEGEALPPPVSG HADGGNGAGGGGWIMALFIGFVVAMVARGMLGALPRPLRALLTGVAAGGAALLSTSLLFASAGAAVIGLLAGLACGSPGR FVGGGGWGGGGFGGFGGGRGGFGGGGGWGGGGGSSGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=217, Percent_Identity=29.9539170506912, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 28278; Mature: 28147
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLLLPASLLAQELAAIPPLRSPVVDVTGTLDAGQIQQLEQQALALQQRKGAQLQILIV CEEEEECHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE PTTQPEAIEQYTQRVFDQWKIGRKGVDDGVLLLVAKDDRRVRIQPGYGLEGAIADITANR ECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHH IIQEYLAPRFREGDYAGGISAATATLAGLIEGEALPPPVSGHADGGNGAGGGGWIMALFI HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH GFVVAMVARGMLGALPRPLRALLTGVAAGGAALLSTSLLFASAGAAVIGLLAGLACGSPG HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFVGGGGWGGGGFGGFGGGRGGFGGGGGWGGGGGSSGGGGASGSW CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALLLLPASLLAQELAAIPPLRSPVVDVTGTLDAGQIQQLEQQALALQQRKGAQLQILIV EEEEECHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE PTTQPEAIEQYTQRVFDQWKIGRKGVDDGVLLLVAKDDRRVRIQPGYGLEGAIADITANR ECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHH IIQEYLAPRFREGDYAGGISAATATLAGLIEGEALPPPVSGHADGGNGAGGGGWIMALFI HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH GFVVAMVARGMLGALPRPLRALLTGVAAGGAALLSTSLLFASAGAAVIGLLAGLACGSPG HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RFVGGGGWGGGGFGGFGGGRGGFGGGGGWGGGGGSSGGGGASGSW CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]