| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is dhfrIII [H]
Identifier: 84625198
GI number: 84625198
Start: 4003331
End: 4003825
Strand: Reverse
Name: dhfrIII [H]
Synonym: XOO_3541
Alternate gene names: 84625198
Gene position: 4003825-4003331 (Counterclockwise)
Preceding gene: 84625199
Following gene: 84625188
Centisome position: 81.05
GC content: 63.43
Gene sequence:
>495_bases ATGAAGGTGATCTTGATCGTCGCCTTCGACCGCAACAACGCCATCGGCCGTGATAACGATCTGCCGTGGAAACTGCCCGA TGATCTCAAGCGCTTCAAAGCGCTGACGCTGGGCAAGCCGATCCTGATGGGGCGCAAGACGGCGCAGTCTCTCAGGCGTG CGTTGCCGGGGCGGTTGAATCTGGTGCTGACGCGTTCGGGGCTGGTGCCGTTCGACGGCATGCAGGCGGTGGCATCGGTG GCGCAGGCGGTCGAACGCGCCGTGCAAGACGGTGCGCAGGAGCTGTGCGTGATCGGTGGCGGGGAGGTATATCGCCTGAC CATGGAACGTGCCGATCTGCTGGCCGTGACCGAAGTGGACACGGCGGTAGACGATGCCGACACGCATTTTCCGCCGATCG ACCCGGCGGCGTGGTCGCCTGTGAGGCGTCAGTTACATCCTGCCGACGATCGGCACGCCTATGCGTTTTCGTTCGTGGAT TACGAACGCCGCTGA
Upstream 100 bases:
>100_bases CGCTTGGCGGCATTTTTGTGTGCTATGTGGCCGTTTTTTTGTTCGGAATGCTGGGCCGGAAGTCTGCAATGAAAATCTAT AACGCGCTCTATCCAGACGC
Downstream 100 bases:
>100_bases GTTATCCGCTATCGAATGCCCGTCATCGCGATGACGACGGGCGCGCCATGTACTCAGTCTTGTGGCGTATCGACTGGCGG CTTCGCCGGCACCGCAGTGT
Product: dihydrofolate reductase type III
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKVILIVAFDRNNAIGRDNDLPWKLPDDLKRFKALTLGKPILMGRKTAQSLRRALPGRLNLVLTRSGLVPFDGMQAVASV AQAVERAVQDGAQELCVIGGGEVYRLTMERADLLAVTEVDTAVDDADTHFPPIDPAAWSPVRRQLHPADDRHAYAFSFVD YERR
Sequences:
>Translated_164_residues MKVILIVAFDRNNAIGRDNDLPWKLPDDLKRFKALTLGKPILMGRKTAQSLRRALPGRLNLVLTRSGLVPFDGMQAVASV AQAVERAVQDGAQELCVIGGGEVYRLTMERADLLAVTEVDTAVDDADTHFPPIDPAAWSPVRRQLHPADDRHAYAFSFVD YERR >Mature_164_residues MKVILIVAFDRNNAIGRDNDLPWKLPDDLKRFKALTLGKPILMGRKTAQSLRRALPGRLNLVLTRSGLVPFDGMQAVASV AQAVERAVQDGAQELCVIGGGEVYRLTMERADLLAVTEVDTAVDDADTHFPPIDPAAWSPVRRQLHPADDRHAYAFSFVD YERR
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Escherichia coli, GI1786233, Length=162, Percent_Identity=39.5061728395062, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18221; Mature: 18221
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVILIVAFDRNNAIGRDNDLPWKLPDDLKRFKALTLGKPILMGRKTAQSLRRALPGRLN CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCEE LVLTRSGLVPFDGMQAVASVAQAVERAVQDGAQELCVIGGGEVYRLTMERADLLAVTEVD EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEEECCCCEEEEEHHH TAVDDADTHFPPIDPAAWSPVRRQLHPADDRHAYAFSFVDYERR HHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MKVILIVAFDRNNAIGRDNDLPWKLPDDLKRFKALTLGKPILMGRKTAQSLRRALPGRLN CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCEE LVLTRSGLVPFDGMQAVASVAQAVERAVQDGAQELCVIGGGEVYRLTMERADLLAVTEVD EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEEECCCCEEEEEHHH TAVDDADTHFPPIDPAAWSPVRRQLHPADDRHAYAFSFVDYERR HHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]