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The map label for this gene is visC [H]

Identifier: 84625187

GI number: 84625187

Start: 3991108

End: 3992289

Strand: Reverse

Name: visC [H]

Synonym: XOO_3530

Alternate gene names: 84625187

Gene position: 3992289-3991108 (Counterclockwise)

Preceding gene: 84625188

Following gene: 84625186

Centisome position: 80.81

GC content: 68.7

Gene sequence:

>1182_bases
ATGAGCCGACGCAGCACCCGTGATGCCGTGATCGTCGGCGGTGGCGTTGTCGGTGCCGCCTGCGCGCTGGCGCTGACCGA
TGCCGGCCTGAGCGTTGCCTTGGTCGAAGGGCGCGCGCCCGCACGCTGGCGCGCTGATCAACCTGATCTGCGCGTCTATG
CCTTCGCCGCCGATAACGTTGCGTTGCTCGACAGCCTGGGCGTGTGGAACGCGGTGCGCACCGCACGCGTGCAGCCGTAC
CGGCGGATGCGCGTCTGGGACGCTGCTGGTGGCGGCGAACTGGGCTTCGATGCCGACACGCTCGGGCGCGAGCAACTGGG
CTGGATCATCGAAAACGATGTACTGGTCGACCGCGTGTGGGCAGCCGTGCATGCGTCCGGCATCGAGGTGCATTGCCCCG
CACGTGTGGTCGAGCTGGAACAGGACGCCACCAGCGTGCGCCTGCGCCTGGAGGACGGCAGCCGGTTGGAAGCGGCAATG
GCGATTGCCGCCGATGGCGCGGCCTCTACCCTGCGTGAGCTCGCCGGGCTGCCGGTTTCGCGGCACGCCTACGCACAGCG
TGGCGTGGTCGCTTTCGTGGAAACCGAGCAGCCGCATCAGGCCACTGCCTGGCAACGCTTCCTGACCACTGGGCCGCTGG
CATTTTTGCCATTCGCCGAGGGGCGCAGTTCGATCGTGTGGACCTTGCCGGATGCCGAGGCCGAGCGTGTGCTTTCGCTG
GACGATGCGGACTTTTCGCGCGAGTTGACCCAGGCCTTTGCCGCCCGTCTGGGCGAAGTGCGCGTGGCGTCGGCGCGCAC
CGCCTTCCCGCTGCAGCGGCAGTTAGTGCAGCAATACGTGAGCGGCCCCGTGCTGACGTTGGGCGACGCCGCGCATGTCG
TGCATCCGCTGGCCGGGCAGGGCGTCAACCTGGGCCTGCGCGATGTGGCCGCGTTGCGTCAGACCGTGCGCGAGGCGATC
GCCAAGCGTGCGGAGTGGGCCGCGCCGCATCGCCTGCAGCGCTGGGCGCGCACCCGGCGTAGCGAGAACACCGTTGCCGC
CTACGGCTTCGACGCGATCAACACAGTGTTCTCCAATGACCAGATGCACCTGACCTTGTTGCGCGGATCGGTGCTTGGCC
TGGCCGGCAAGTTGCCGCCGCTGGTCGATATGCTGTGGAAGCGCGCCTCCGGCGGCGCGTGA

Upstream 100 bases:

>100_bases
GTTTGTTCGCGACCTCACAGGCAGCGCCGTTGCAGTCGATGCTGGTCGGCGGCGCCATGGGTTTGCGTGGCGACATACCG
CAGCTTTGCCGGGGCGTCGC

Downstream 100 bases:

>100_bases
CTGCACCACCAAAGAAGCCGTGACCTGCATCGGCGGCTGTCAGTGACGTCTTGATATGCCTTTATAGATATAGCGGAGAC
CGCAGGTTCCATACGACGAA

Product: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSRRSTRDAVIVGGGVVGAACALALTDAGLSVALVEGRAPARWRADQPDLRVYAFAADNVALLDSLGVWNAVRTARVQPY
RRMRVWDAAGGGELGFDADTLGREQLGWIIENDVLVDRVWAAVHASGIEVHCPARVVELEQDATSVRLRLEDGSRLEAAM
AIAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEQPHQATAWQRFLTTGPLAFLPFAEGRSSIVWTLPDAEAERVLSL
DDADFSRELTQAFAARLGEVRVASARTAFPLQRQLVQQYVSGPVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQTVREAI
AKRAEWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDQMHLTLLRGSVLGLAGKLPPLVDMLWKRASGGA

Sequences:

>Translated_393_residues
MSRRSTRDAVIVGGGVVGAACALALTDAGLSVALVEGRAPARWRADQPDLRVYAFAADNVALLDSLGVWNAVRTARVQPY
RRMRVWDAAGGGELGFDADTLGREQLGWIIENDVLVDRVWAAVHASGIEVHCPARVVELEQDATSVRLRLEDGSRLEAAM
AIAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEQPHQATAWQRFLTTGPLAFLPFAEGRSSIVWTLPDAEAERVLSL
DDADFSRELTQAFAARLGEVRVASARTAFPLQRQLVQQYVSGPVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQTVREAI
AKRAEWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDQMHLTLLRGSVLGLAGKLPPLVDMLWKRASGGA
>Mature_392_residues
SRRSTRDAVIVGGGVVGAACALALTDAGLSVALVEGRAPARWRADQPDLRVYAFAADNVALLDSLGVWNAVRTARVQPYR
RMRVWDAAGGGELGFDADTLGREQLGWIIENDVLVDRVWAAVHASGIEVHCPARVVELEQDATSVRLRLEDGSRLEAAMA
IAADGAASTLRELAGLPVSRHAYAQRGVVAFVETEQPHQATAWQRFLTTGPLAFLPFAEGRSSIVWTLPDAEAERVLSLD
DADFSRELTQAFAARLGEVRVASARTAFPLQRQLVQQYVSGPVLTLGDAAHVVHPLAGQGVNLGLRDVAALRQTVREAIA
KRAEWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSNDQMHLTLLRGSVLGLAGKLPPLVDMLWKRASGGA

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=385, Percent_Identity=29.3506493506493, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI32967307, Length=351, Percent_Identity=29.0598290598291, Blast_Score=133, Evalue=3e-31,
Organism=Escherichia coli, GI1789273, Length=387, Percent_Identity=38.2428940568475, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1786883, Length=376, Percent_Identity=38.031914893617, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1789274, Length=386, Percent_Identity=33.160621761658, Blast_Score=186, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25146631, Length=438, Percent_Identity=28.7671232876712, Blast_Score=170, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6321694, Length=460, Percent_Identity=22.3913043478261, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19920760, Length=420, Percent_Identity=30, Blast_Score=169, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42441; Mature: 42309

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRSTRDAVIVGGGVVGAACALALTDAGLSVALVEGRAPARWRADQPDLRVYAFAADNV
CCCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
ALLDSLGVWNAVRTARVQPYRRMRVWDAAGGGELGFDADTLGREQLGWIIENDVLVDRVW
HHHHHCCHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHCCHHHCCEEEECCHHHHHHH
AAVHASGIEVHCPARVVELEQDATSVRLRLEDGSRLEAAMAIAADGAASTLRELAGLPVS
HHHHHCCEEEECCCEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
RHAYAQRGVVAFVETEQPHQATAWQRFLTTGPLAFLPFAEGRSSIVWTLPDAEAERVLSL
HHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHEEEC
DDADFSRELTQAFAARLGEVRVASARTAFPLQRQLVQQYVSGPVLTLGDAAHVVHPLAGQ
CCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCC
GVNLGLRDVAALRQTVREAIAKRAEWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSND
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCC
QMHLTLLRGSVLGLAGKLPPLVDMLWKRASGGA
CEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRRSTRDAVIVGGGVVGAACALALTDAGLSVALVEGRAPARWRADQPDLRVYAFAADNV
CCCCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
ALLDSLGVWNAVRTARVQPYRRMRVWDAAGGGELGFDADTLGREQLGWIIENDVLVDRVW
HHHHHCCHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHCCHHHCCEEEECCHHHHHHH
AAVHASGIEVHCPARVVELEQDATSVRLRLEDGSRLEAAMAIAADGAASTLRELAGLPVS
HHHHHCCEEEECCCEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
RHAYAQRGVVAFVETEQPHQATAWQRFLTTGPLAFLPFAEGRSSIVWTLPDAEAERVLSL
HHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHEEEC
DDADFSRELTQAFAARLGEVRVASARTAFPLQRQLVQQYVSGPVLTLGDAAHVVHPLAGQ
CCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCC
GVNLGLRDVAALRQTVREAIAKRAEWAAPHRLQRWARTRRSENTVAAYGFDAINTVFSND
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCC
QMHLTLLRGSVLGLAGKLPPLVDMLWKRASGGA
CEEEEEECCHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]