| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yfcF [C]
Identifier: 84625161
GI number: 84625161
Start: 3966700
End: 3967341
Strand: Reverse
Name: yfcF [C]
Synonym: XOO_3504
Alternate gene names: 84625161
Gene position: 3967341-3966700 (Counterclockwise)
Preceding gene: 84625163
Following gene: 84625160
Centisome position: 80.31
GC content: 67.13
Gene sequence:
>642_bases ATGCCACTGCCCCGTCTGGTGATCGGCGACAAGACGCTGTCCTCCTGGTCGTTGCGGCCGTGGCTGCTGTTGCGGCACTT CCAGGTGCCGTTCGAGGAAATCGCGCTGCCGCTTGCAACACCCGCGTATCACGCGCGCATTGCCGGGTATTCGCCAACCC GCCAGGTGCCGGTGCTGTGGGACGACACCCTGCATGTGTGGGATTCGCTGGCGATCTGCGAGTACATCAACGAGCGTTGG CTGGACGGCCGCGGCTGGCCGGCCGACCTGGCTGTTCGTGCGCAAGCGCGCGCCGCTGCGGCAGAAATGCATTCGGGCTT TGCCGCCTTGCGCAGCCAGCTGCCGATGAATCTGGCGCGCCCGCCGGGCCCTGCGCAGTGGGATGCGGCTGCCGAGCGCG ACATCACCCGCATCCAGGCGCTGTGGGCCAGCTTGCGCGCCGAAGATGGCCAGGACGGCCCGTTCCTGTGTGGGCAGTTC GGGATCGTCGATGCGATGTTCGCGCCGGTGGCGCTGCGCTTTTCCAGCTACGGTGTACCACTGTTCGAAGCGGCCGGCGA TTATCTGGCAGCGCTGGATGCGTTGCCGGCGTTACGCGATTGGCGTAACGGCGCCAAGCGCGAACGTGTGGAGCGTGGCT GA
Upstream 100 bases:
>100_bases CGAGCGCTGCCTGATCGATGCGCGCGTCAGGGCAGGCCATTGCTAGCGGCCGTCGGTCGCGACGCGTACGCTGCGCCGAC CCTATTGGAGCGCACAGCCC
Downstream 100 bases:
>100_bases GATGCAGATCGCCTACCGCGCCAGTCACATCATCGATGCGCATCTGGCCAAGCACGCACTGGAAGATGCCGGCATCACCG CGTTCGTCTTCGGCGAGTCG
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERW LDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQF GIVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG
Sequences:
>Translated_213_residues MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERW LDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQF GIVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG >Mature_212_residues PLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERWL DGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFG IVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23698; Mature: 23567
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLW CCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHEECCCCCCCCCCEEE DDTLHVWDSLAICEYINERWLDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLAR CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFGIVDAMFAPVALRFSSYGVP CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCH LFEAAGDYLAALDALPALRDWRNGAKRERVERG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure PLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLW CCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHEECCCCCCCCCCEEE DDTLHVWDSLAICEYINERWLDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLAR CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFGIVDAMFAPVALRFSSYGVP CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCH LFEAAGDYLAALDALPALRDWRNGAKRERVERG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA