Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yfcF [C]

Identifier: 84625161

GI number: 84625161

Start: 3966700

End: 3967341

Strand: Reverse

Name: yfcF [C]

Synonym: XOO_3504

Alternate gene names: 84625161

Gene position: 3967341-3966700 (Counterclockwise)

Preceding gene: 84625163

Following gene: 84625160

Centisome position: 80.31

GC content: 67.13

Gene sequence:

>642_bases
ATGCCACTGCCCCGTCTGGTGATCGGCGACAAGACGCTGTCCTCCTGGTCGTTGCGGCCGTGGCTGCTGTTGCGGCACTT
CCAGGTGCCGTTCGAGGAAATCGCGCTGCCGCTTGCAACACCCGCGTATCACGCGCGCATTGCCGGGTATTCGCCAACCC
GCCAGGTGCCGGTGCTGTGGGACGACACCCTGCATGTGTGGGATTCGCTGGCGATCTGCGAGTACATCAACGAGCGTTGG
CTGGACGGCCGCGGCTGGCCGGCCGACCTGGCTGTTCGTGCGCAAGCGCGCGCCGCTGCGGCAGAAATGCATTCGGGCTT
TGCCGCCTTGCGCAGCCAGCTGCCGATGAATCTGGCGCGCCCGCCGGGCCCTGCGCAGTGGGATGCGGCTGCCGAGCGCG
ACATCACCCGCATCCAGGCGCTGTGGGCCAGCTTGCGCGCCGAAGATGGCCAGGACGGCCCGTTCCTGTGTGGGCAGTTC
GGGATCGTCGATGCGATGTTCGCGCCGGTGGCGCTGCGCTTTTCCAGCTACGGTGTACCACTGTTCGAAGCGGCCGGCGA
TTATCTGGCAGCGCTGGATGCGTTGCCGGCGTTACGCGATTGGCGTAACGGCGCCAAGCGCGAACGTGTGGAGCGTGGCT
GA

Upstream 100 bases:

>100_bases
CGAGCGCTGCCTGATCGATGCGCGCGTCAGGGCAGGCCATTGCTAGCGGCCGTCGGTCGCGACGCGTACGCTGCGCCGAC
CCTATTGGAGCGCACAGCCC

Downstream 100 bases:

>100_bases
GATGCAGATCGCCTACCGCGCCAGTCACATCATCGATGCGCATCTGGCCAAGCACGCACTGGAAGATGCCGGCATCACCG
CGTTCGTCTTCGGCGAGTCG

Product: glutathione S-transferase

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERW
LDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQF
GIVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG

Sequences:

>Translated_213_residues
MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERW
LDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQF
GIVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG
>Mature_212_residues
PLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLWDDTLHVWDSLAICEYINERWL
DGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLARPPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFG
IVDAMFAPVALRFSSYGVPLFEAAGDYLAALDALPALRDWRNGAKRERVERG

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23698; Mature: 23567

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLW
CCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHEECCCCCCCCCCEEE
DDTLHVWDSLAICEYINERWLDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLAR
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFGIVDAMFAPVALRFSSYGVP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCH
LFEAAGDYLAALDALPALRDWRNGAKRERVERG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
PLPRLVIGDKTLSSWSLRPWLLLRHFQVPFEEIALPLATPAYHARIAGYSPTRQVPVLW
CCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHEECCCCCCCCCCEEE
DDTLHVWDSLAICEYINERWLDGRGWPADLAVRAQARAAAAEMHSGFAALRSQLPMNLAR
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PPGPAQWDAAAERDITRIQALWASLRAEDGQDGPFLCGQFGIVDAMFAPVALRFSSYGVP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCH
LFEAAGDYLAALDALPALRDWRNGAKRERVERG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA