| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625160
Identifier: 84625160
GI number: 84625160
Start: 3966462
End: 3966809
Strand: Reverse
Name: 84625160
Synonym: XOO_3503
Alternate gene names: NA
Gene position: 3966809-3966462 (Counterclockwise)
Preceding gene: 84625161
Following gene: 84625147
Centisome position: 80.3
GC content: 65.8
Gene sequence:
>348_bases GTGTACCACTGTTCGAAGCGGCCGGCGATTATCTGGCAGCGCTGGATGCGTTGCCGGCGTTACGCGATTGGCGTAACGGC GCCAAGCGCGAACGTGTGGAGCGTGGCTGAGATGCAGATCGCCTACCGCGCCAGTCACATCATCGATGCGCATCTGGCCA AGCACGCACTGGAAGATGCCGGCATCACCGCGTTCGTCTTCGGCGAGTCGCTGCTGGGCGGCGCCGGCGGGCTACCTGCC TTCGGCCTGCTGCAGGTCTGCGTGGCCGATCTGCAGTTGAGCCAGGCCCAGGCGGTGCTGGCAGAGATCGGCTTGTGCGG GCAGATCACGCGGGCGCTAGAGCGTTGA
Upstream 100 bases:
>100_bases TTGCGCGCCGAAGATGGCCAGGACGGCCCGTTCCTGTGTGGGCAGTTCGGGATCGTCGATGCGATGTTCGCGCCGGTGGC GCTGCGCTTTTCCAGCTACG
Downstream 100 bases:
>100_bases GTGGGCCAGGCGCCCGCGCAATGCCTGGGTAGGAACGCACCCGGGCGCGACGGCCATTCCCGGGAACACTCATCGCGCCC AGGTGCAATCCCACGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MYHCSKRPAIIWQRWMRCRRYAIGVTAPSANVWSVAEMQIAYRASHIIDAHLAKHALEDAGITAFVFGESLLGGAGGLPA FGLLQVCVADLQLSQAQAVLAEIGLCGQITRALER
Sequences:
>Translated_115_residues MYHCSKRPAIIWQRWMRCRRYAIGVTAPSANVWSVAEMQIAYRASHIIDAHLAKHALEDAGITAFVFGESLLGGAGGLPA FGLLQVCVADLQLSQAQAVLAEIGLCGQITRALER >Mature_115_residues MYHCSKRPAIIWQRWMRCRRYAIGVTAPSANVWSVAEMQIAYRASHIIDAHLAKHALEDAGITAFVFGESLLGGAGGLPA FGLLQVCVADLQLSQAQAVLAEIGLCGQITRALER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12479; Mature: 12479
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHCSKRPAIIWQRWMRCRRYAIGVTAPSANVWSVAEMQIAYRASHIIDAHLAKHALEDA CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GITAFVFGESLLGGAGGLPAFGLLQVCVADLQLSQAQAVLAEIGLCGQITRALER CCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MYHCSKRPAIIWQRWMRCRRYAIGVTAPSANVWSVAEMQIAYRASHIIDAHLAKHALEDA CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GITAFVFGESLLGGAGGLPAFGLLQVCVADLQLSQAQAVLAEIGLCGQITRALER CCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA