| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is cysW [H]
Identifier: 84625140
GI number: 84625140
Start: 3948717
End: 3949670
Strand: Reverse
Name: cysW [H]
Synonym: XOO_3483
Alternate gene names: 84625140
Gene position: 3949670-3948717 (Counterclockwise)
Preceding gene: 84625141
Following gene: 84625139
Centisome position: 79.95
GC content: 63.1
Gene sequence:
>954_bases ATGAGCGATGCTGTTTCCTCGCTGCCCTCCATGTTGCCGACCCATGCCATGACCAGGCAGGCGCGTCGCATCACCGAGTC GGCCAGCAACGAGCCGCGTTGGGTGCAATGGCTGATGATGTTCGGCGCGGTACTCTTTTTGTTGGCGTTTTTGCTGCTGC CGCTGGTGCTGGTGTTTGCCGAGGCGTTGCGTGGCGGTTGGGAGACCTTCCTGCGCGTAGTGGTCGACCCGGACGCGTTG TCGGCGATCAAGCTGACCTTGCTGGTGACGGCGATCGTGCTGCCATTGAATCTGATATTCGGCGTGGCCGCTGCGTGGGC CATCAGCAAGCACCAGTTCTGGGGCAAACGTCTGCTGGTCAGCCTGATCGACCTGCCGTTTTCGGTGTCGCCGGTGGTGG CGGGCTTGATCTTCGTGCTGATCTTCGGCCGCAGCGGCTGGGCCTGGCCATTGATCGACGAAGGCTGGCATGTGCAGTTG CCGGCGCTGGGCGAATGTGTGATCCAGCTGCCGCGGATCGTGTTCGCGTTGCCGGGCATCGTGCTGGCGACCACGTTCGT GACCTTCCCCTTCATCGCGCGCGAACTGATGCCGCTGATGGAGCAGCAGGGCAGCGACGAAGAACTGGCGGCACTGAGTC TGGGCGCGAACGGCTGGCAGATGTTCTGGCGAGTGACGCTGCCCAATATCCGTTGGGGCCTGTTGTATGGCGTGCTGCTG TGTGCGGCGCGTGCGATGGGCGAATTCGGCGCTGTGTCGGTGGTGTCCGGGCATATCCGTGGACGCACCAACACGCTGCC GCTGCATGTGGAAATTCTCTACAACGAATATGCCTACAGCGCCGCATTCGCCTGCGCCTCGCTGCTGGCACTGACCGCGC TGCTGACCTTGGCGCTGAAGACGTATCTGGAATGGCGGCACGGCGATTCGCTGGCCGCCAACCACCGCCACTGA
Upstream 100 bases:
>100_bases CGACTGCCATTGCCGCGGCGATGTTATTACTGTCATTCGTCATTTTGCTGGTGGTCAATACCTTGCAGGCACGCCTGCTG CAGTATCAACGGAGGCCCGC
Downstream 100 bases:
>100_bases GGTGACCATGGGCATCCGCATCCACCATCTGCGCAAGCAGTTCGAGACCTTTACCGCGCTGGACGACATCACCCTGGATG TGCGCCAGGGCGAGTTGCTG
Product: ABC transporter sulfate permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSDAVSSLPSMLPTHAMTRQARRITESASNEPRWVQWLMMFGAVLFLLAFLLLPLVLVFAEALRGGWETFLRVVVDPDAL SAIKLTLLVTAIVLPLNLIFGVAAAWAISKHQFWGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRSGWAWPLIDEGWHVQL PALGECVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH
Sequences:
>Translated_317_residues MSDAVSSLPSMLPTHAMTRQARRITESASNEPRWVQWLMMFGAVLFLLAFLLLPLVLVFAEALRGGWETFLRVVVDPDAL SAIKLTLLVTAIVLPLNLIFGVAAAWAISKHQFWGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRSGWAWPLIDEGWHVQL PALGECVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH >Mature_316_residues SDAVSSLPSMLPTHAMTRQARRITESASNEPRWVQWLMMFGAVLFLLAFLLLPLVLVFAEALRGGWETFLRVVVDPDALS AIKLTLLVTAIVLPLNLIFGVAAAWAISKHQFWGKRLLVSLIDLPFSVSPVVAGLIFVLIFGRSGWAWPLIDEGWHVQLP ALGECVIQLPRIVFALPGIVLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLLC AARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALKTYLEWRHGDSLAANHRH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=304, Percent_Identity=46.3815789473684, Blast_Score=251, Evalue=4e-68, Organism=Escherichia coli, GI1788764, Length=243, Percent_Identity=32.9218106995885, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1786980, Length=197, Percent_Identity=32.994923857868, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34985; Mature: 34854
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVSSLPSMLPTHAMTRQARRITESASNEPRWVQWLMMFGAVLFLLAFLLLPLVLVFA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGGWETFLRVVVDPDALSAIKLTLLVTAIVLPLNLIFGVAAAWAISKHQFWGKRLLV HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIDLPFSVSPVVAGLIFVLIFGRSGWAWPLIDEGWHVQLPALGECVIQLPRIVFALPGI HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH VLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHH CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALK HHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH TYLEWRHGDSLAANHRH HHHHHHCCCCCCCCCCC >Mature Secondary Structure SDAVSSLPSMLPTHAMTRQARRITESASNEPRWVQWLMMFGAVLFLLAFLLLPLVLVFA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGGWETFLRVVVDPDALSAIKLTLLVTAIVLPLNLIFGVAAAWAISKHQFWGKRLLV HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIDLPFSVSPVVAGLIFVLIFGRSGWAWPLIDEGWHVQLPALGECVIQLPRIVFALPGI HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH VLATTFVTFPFIARELMPLMEQQGSDEELAALSLGANGWQMFWRVTLPNIRWGLLYGVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHH CAARAMGEFGAVSVVSGHIRGRTNTLPLHVEILYNEYAYSAAFACASLLALTALLTLALK HHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH TYLEWRHGDSLAANHRH HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]