| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625081
Identifier: 84625081
GI number: 84625081
Start: 3883844
End: 3884683
Strand: Reverse
Name: 84625081
Synonym: XOO_3424
Alternate gene names: NA
Gene position: 3884683-3883844 (Counterclockwise)
Preceding gene: 84625082
Following gene: 84625080
Centisome position: 78.63
GC content: 65.24
Gene sequence:
>840_bases TTGACTGCAAGGGACTTCGATCCTGGTCTCGACGCCAGCATCCTGCCCGGCTACGACTTCATCAGCGATGCCAACGCCGC GCGCGACGGCAACGTGCGCGACGACAATCCAGCCGACGAAGGCGACTGGAACTCCACCAGTGGGTGCTCCACGTCCAATT CCAGCTGGCATGGGACCCATGCCGCCGGCACGGTGGCAGCGGTGACCACCACCACCGGCGTTGCCGGCACTGCGTTCAAT GCCAAGGTGGTGCCGGTGCGCGTGCTGGGCCGGTGCGGTGGTTCGCTGTCGGATATCGCCGATGCCATCATTTGGGCATC CGGCGGCAGTGTCAGCGGTGTGCCGGCCAATGCCAACGTGGCCGAAGTCATCAACATGTCGCTGGGCGGCGGCAGCTGTT TGAGCAGTTACCAGAAGTTACCAGAACGCTATCAACAGCGCGGTGTCGCGTGGCACCAACGTGGTGGTGGCCTGCATCAG TGCGGCCAACGTGTCCGGTTTGTTGCCGGCCAACTGCGCCAACGTGATCGCGGTGGCGGCCACCACCTCGGCTGGTGCCA AGGCCAGTTATTCCAACTTCGGCGCCGAAATCGATGTTTCCGCACCGGGTTCGGGCATTCTGTCCACCCTCAACAGCGGC ACCACCACACCGGGCACTCCCAGCTACGCCTCGTAGAACGGCACCTCGATGGCGGTGCCGCATGTGGCTGGCGTGGTGGC GCTGATGCAGTCGGTGGCCTTGAATCCGCTGACGCCGGCCACGGTGAAAGGCCTGCTCAAGGCCAGTGCACGGCCATTGC TGGTGGCCTGCACGCAGGGGGGGCGGGGCAGGGCTGGTGA
Upstream 100 bases:
>100_bases TTTGGACGGGTTTACTGAACGGATCGATAACAAGGGAGATCCGGGGCACTGGAGCAGTCACCACTGCGACGGTTTCGGAA CGGCCGCTTCGGCAGTTCTC
Downstream 100 bases:
>100_bases ATGCTGATGGTGCGGTGGCGGCGGTGATCGCTTCGACCACGTTGACCAGGAATGTGGCACGCACGCGGCCGAGCGCAGCG CTCTCCGATTCGCTGTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTARDFDPGLDASILPGYDFISDANAARDGNVRDDNPADEGDWNSTSGCSTSNSSWHGTHAAGTVAAVTTTTGVAGTAFN AKVVPVRVLGRCGGSLSDIADAIIWASGGSVSGVPANANVAEVINMSLGGGSCLSSYQKLPERYQQRGVAWHQRGGGLHQ CGQRVRFVAGQLRQRDRGGGHHLGWCQGQLFQLRRRNRCFRTGFGHSVHPQQRHHHTGHSQLRLVERHLDGGAACGWRGG ADAVGGLESADAGHGERPAQGQCTAIAGGLHAGGAGQGW
Sequences:
>Translated_279_residues MTARDFDPGLDASILPGYDFISDANAARDGNVRDDNPADEGDWNSTSGCSTSNSSWHGTHAAGTVAAVTTTTGVAGTAFN AKVVPVRVLGRCGGSLSDIADAIIWASGGSVSGVPANANVAEVINMSLGGGSCLSSYQKLPERYQQRGVAWHQRGGGLHQ CGQRVRFVAGQLRQRDRGGGHHLGWCQGQLFQLRRRNRCFRTGFGHSVHPQQRHHHTGHSQLRLVERHLDGGAACGWRGG ADAVGGLESADAGHGERPAQGQCTAIAGGLHAGGAGQGW >Mature_278_residues TARDFDPGLDASILPGYDFISDANAARDGNVRDDNPADEGDWNSTSGCSTSNSSWHGTHAAGTVAAVTTTTGVAGTAFNA KVVPVRVLGRCGGSLSDIADAIIWASGGSVSGVPANANVAEVINMSLGGGSCLSSYQKLPERYQQRGVAWHQRGGGLHQC GQRVRFVAGQLRQRDRGGGHHLGWCQGQLFQLRRRNRCFRTGFGHSVHPQQRHHHTGHSQLRLVERHLDGGAACGWRGGA DAVGGLESADAGHGERPAQGQCTAIAGGLHAGGAGQGW
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 29116; Mature: 28985
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARDFDPGLDASILPGYDFISDANAARDGNVRDDNPADEGDWNSTSGCSTSNSSWHGTH CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGTVAAVTTTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGSVSGVPANANV CCCEEEEEEECCCCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCCH AEVINMSLGGGSCLSSYQKLPERYQQRGVAWHQRGGGLHQCGQRVRFVAGQLRQRDRGGG HHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCC HHLGWCQGQLFQLRRRNRCFRTGFGHSVHPQQRHHHTGHSQLRLVERHLDGGAACGWRGG CCCCHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC ADAVGGLESADAGHGERPAQGQCTAIAGGLHAGGAGQGW CHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure TARDFDPGLDASILPGYDFISDANAARDGNVRDDNPADEGDWNSTSGCSTSNSSWHGTH CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGTVAAVTTTTGVAGTAFNAKVVPVRVLGRCGGSLSDIADAIIWASGGSVSGVPANANV CCCEEEEEEECCCCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCCH AEVINMSLGGGSCLSSYQKLPERYQQRGVAWHQRGGGLHQCGQRVRFVAGQLRQRDRGGG HHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCC HHLGWCQGQLFQLRRRNRCFRTGFGHSVHPQQRHHHTGHSQLRLVERHLDGGAACGWRGG CCCCHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC ADAVGGLESADAGHGERPAQGQCTAIAGGLHAGGAGQGW CHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]