| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625080
Identifier: 84625080
GI number: 84625080
Start: 3883503
End: 3883847
Strand: Reverse
Name: 84625080
Synonym: XOO_3423
Alternate gene names: NA
Gene position: 3883847-3883503 (Counterclockwise)
Preceding gene: 84625081
Following gene: 84625077
Centisome position: 78.62
GC content: 65.22
Gene sequence:
>345_bases GTGAATGCTGATGGTGCGGTGGCGGCGGTGATCGCTTCGACCACGTTGACCAGGAATGTGGCACGCACGCGGCCGAGCGC AGCGCTCTCCGATTCGCTGTATTACCAGGTCAATGTGCCCGCCGGCACACGTTCGCTCAAGGTCACGCTCGCCGTTGGCA GCGGCAATGCCGACCTCTCGGTACGTGCGGGTGCGCTACCGACCGATGCTGCGTACAGCTGCCGCAGCATGTTGCCGGGC AATGGCGACAGCTGCACGCTGGCCGCGCCGGCTGCGGGCGTCTATTACGTGCGCTTGAAGGCAACGCTGGGCTTTTCCGG CGTTAGCGTCACCGCGGCGTATTGA
Upstream 100 bases:
>100_bases GCCTTGAATCCGCTGACGCCGGCCACGGTGAAAGGCCTGCTCAAGGCCAGTGCACGGCCATTGCTGGTGGCCTGCACGCA GGGGGGGCGGGGCAGGGCTG
Downstream 100 bases:
>100_bases GTGACTTCGGTGCGGTGGTGCTGCCGCGCCGAGAGATGCTGACGACTGCTGTAGTTCGGCAGTCGCCAGCGTATGCGTGC AGTGTGGCGCGACATCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MNADGAVAAVIASTTLTRNVARTRPSAALSDSLYYQVNVPAGTRSLKVTLAVGSGNADLSVRAGALPTDAAYSCRSMLPG NGDSCTLAAPAAGVYYVRLKATLGFSGVSVTAAY
Sequences:
>Translated_114_residues MNADGAVAAVIASTTLTRNVARTRPSAALSDSLYYQVNVPAGTRSLKVTLAVGSGNADLSVRAGALPTDAAYSCRSMLPG NGDSCTLAAPAAGVYYVRLKATLGFSGVSVTAAY >Mature_114_residues MNADGAVAAVIASTTLTRNVARTRPSAALSDSLYYQVNVPAGTRSLKVTLAVGSGNADLSVRAGALPTDAAYSCRSMLPG NGDSCTLAAPAAGVYYVRLKATLGFSGVSVTAAY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 11460; Mature: 11460
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADGAVAAVIASTTLTRNVARTRPSAALSDSLYYQVNVPAGTRSLKVTLAVGSGNADLS CCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEE VRAGALPTDAAYSCRSMLPGNGDSCTLAAPAAGVYYVRLKATLGFSGVSVTAAY EEECCCCCCCCCHHHHCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MNADGAVAAVIASTTLTRNVARTRPSAALSDSLYYQVNVPAGTRSLKVTLAVGSGNADLS CCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEE VRAGALPTDAAYSCRSMLPGNGDSCTLAAPAAGVYYVRLKATLGFSGVSVTAAY EEECCCCCCCCCHHHHCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]