| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624968
Identifier: 84624968
GI number: 84624968
Start: 3772675
End: 3773154
Strand: Reverse
Name: 84624968
Synonym: XOO_3311
Alternate gene names: NA
Gene position: 3773154-3772675 (Counterclockwise)
Preceding gene: 84624969
Following gene: 84624967
Centisome position: 76.38
GC content: 56.67
Gene sequence:
>480_bases ATGAAGATCGCCCGCTGCGTCCTGTATGGCCTGCTGCTGACGTGGATCAGCGCCTGCCACGGCGGCAATACCGTGACCAC CAATCTGGTGGGTTACAACCATACCGACAAGGATGTCGGGCATTTCACCGTGGATGGGAATGAAGGCGGTTTTTTGCAGG CGCATCGGGGAGGAGGTGGATTTACTTGCTGTATCAGCGTGCCTGACCCCTGGAGGCCAGGCTTGAAGGTCAAGGTCGGC TGGACCGATGACTACGACGAGAATTATCAGGAACGTGTCGTCGAGATCCCGAAATATGACGCAAAACGCACCGGGCAGTT CTCCGTTCACTTCCTGCGCAATGGCGAAATCAAGGTATTCGTGCCGTTGGGTGGTCTGGGTGGCCCGGATTATCCATTGA AGGGGCCGGAAGCGGGCCTCTATCCTGGCGAAGATCCTGTCGAGGTCTGGAAGCATGGACGGAAAGGAGATCAGAAATGA
Upstream 100 bases:
>100_bases ACCCGGACTACCCGCTCAAAGGGAAAGAGGCCGAACTGACGCCAGGCGTGCCGCCCAAGGGGCCGTTCGACAAATGAAAC CGCGACTGAGGCCACAGATG
Downstream 100 bases:
>100_bases CGTTCTATCCCACTGGGGCGTTGCCGATGCCGCACGATGGTCAGCGTCGCCTTACTCCTTCAGAGGCACAGCGCCGCGCG GAGGCAATGGCATGCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKIARCVLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGNEGGFLQAHRGGGGFTCCISVPDPWRPGLKVKVG WTDDYDENYQERVVEIPKYDAKRTGQFSVHFLRNGEIKVFVPLGGLGGPDYPLKGPEAGLYPGEDPVEVWKHGRKGDQK
Sequences:
>Translated_159_residues MKIARCVLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGNEGGFLQAHRGGGGFTCCISVPDPWRPGLKVKVG WTDDYDENYQERVVEIPKYDAKRTGQFSVHFLRNGEIKVFVPLGGLGGPDYPLKGPEAGLYPGEDPVEVWKHGRKGDQK >Mature_159_residues MKIARCVLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGNEGGFLQAHRGGGGFTCCISVPDPWRPGLKVKVG WTDDYDENYQERVVEIPKYDAKRTGQFSVHFLRNGEIKVFVPLGGLGGPDYPLKGPEAGLYPGEDPVEVWKHGRKGDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17489; Mature: 17489
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIARCVLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGNEGGFLQAHRGGGG CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCC FTCCISVPDPWRPGLKVKVGWTDDYDENYQERVVEIPKYDAKRTGQFSVHFLRNGEIKVF EEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHEECCCCCCCCCCCEEEEEEECCCEEEE VPLGGLGGPDYPLKGPEAGLYPGEDPVEVWKHGRKGDQK EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MKIARCVLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGNEGGFLQAHRGGGG CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCC FTCCISVPDPWRPGLKVKVGWTDDYDENYQERVVEIPKYDAKRTGQFSVHFLRNGEIKVF EEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHEECCCCCCCCCCCEEEEEEECCCEEEE VPLGGLGGPDYPLKGPEAGLYPGEDPVEVWKHGRKGDQK EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA