| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624969
Identifier: 84624969
GI number: 84624969
Start: 3773178
End: 3773642
Strand: Reverse
Name: 84624969
Synonym: XOO_3312
Alternate gene names: NA
Gene position: 3773642-3773178 (Counterclockwise)
Preceding gene: 84624970
Following gene: 84624968
Centisome position: 76.39
GC content: 60.65
Gene sequence:
>465_bases GTGAAACATACTCCATGGACAGCCTGGGGCATCGCGATTCTGCTCGGGTTGCTGCCATGTCTGGCGGCGTGCGGCCAGGA ATCCGTTGGCGTCAACCTCGTGGGCTACAACCACACCGACAAGGACATCGGACACTTTACGGTGGACGGAAGCGAAGGTG GGTTTCTGCAAGCCAATAGAGGCGGGGGGAAGTTCGCGTGCTGCATCGACATCCCCAAGCCCTGGAAGCCGGGCATGACC GTGACGGTCGGCTGGACCGACGACTACGACGAGAACTATCAGGAGCGCCGGGTGCCAGTGCCGCGTTACGACAAGTATGG CGACATGGCAGTGCATTTTCTGCGCAACGGCCAGATCAAGGTTTTCGTGACCATGTATGCCCTGTGGCACCCGGACTACC CGCTCAAAGGGAAAGAGGCCGAACTGACGCCAGGCGTGCCGCCCAAGGGGCCGTTCGACAAATGA
Upstream 100 bases:
>100_bases CCACGGTTCCCGCCGATGTCTGGGAGCTGGGGAGGCCGCTCTGGGAATCCGCGCCGATAGCGCCTTCAAACGACATCGCC GACCATCTCAGGAGCGCACT
Downstream 100 bases:
>100_bases AACCGCGACTGAGGCCACAGATGATGAAGATCGCCCGCTGCGTCCTGTATGGCCTGCTGCTGACGTGGATCAGCGCCTGC CACGGCGGCAATACCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKHTPWTAWGIAILLGLLPCLAACGQESVGVNLVGYNHTDKDIGHFTVDGSEGGFLQANRGGGKFACCIDIPKPWKPGMT VTVGWTDDYDENYQERRVPVPRYDKYGDMAVHFLRNGQIKVFVTMYALWHPDYPLKGKEAELTPGVPPKGPFDK
Sequences:
>Translated_154_residues MKHTPWTAWGIAILLGLLPCLAACGQESVGVNLVGYNHTDKDIGHFTVDGSEGGFLQANRGGGKFACCIDIPKPWKPGMT VTVGWTDDYDENYQERRVPVPRYDKYGDMAVHFLRNGQIKVFVTMYALWHPDYPLKGKEAELTPGVPPKGPFDK >Mature_154_residues MKHTPWTAWGIAILLGLLPCLAACGQESVGVNLVGYNHTDKDIGHFTVDGSEGGFLQANRGGGKFACCIDIPKPWKPGMT VTVGWTDDYDENYQERRVPVPRYDKYGDMAVHFLRNGQIKVFVTMYALWHPDYPLKGKEAELTPGVPPKGPFDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17096; Mature: 17096
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTPWTAWGIAILLGLLPCLAACGQESVGVNLVGYNHTDKDIGHFTVDGSEGGFLQANR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECC GGGKFACCIDIPKPWKPGMTVTVGWTDDYDENYQERRVPVPRYDKYGDMAVHFLRNGQIK CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEE VFVTMYALWHPDYPLKGKEAELTPGVPPKGPFDK EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHTPWTAWGIAILLGLLPCLAACGQESVGVNLVGYNHTDKDIGHFTVDGSEGGFLQANR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECC GGGKFACCIDIPKPWKPGMTVTVGWTDDYDENYQERRVPVPRYDKYGDMAVHFLRNGQIK CCCEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEE VFVTMYALWHPDYPLKGKEAELTPGVPPKGPFDK EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA