Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624960

Identifier: 84624960

GI number: 84624960

Start: 3761192

End: 3761785

Strand: Reverse

Name: 84624960

Synonym: XOO_3303

Alternate gene names: NA

Gene position: 3761785-3761192 (Counterclockwise)

Preceding gene: 84624961

Following gene: 84624959

Centisome position: 76.15

GC content: 70.71

Gene sequence:

>594_bases
ATGCACGGGCCCGGAGCAAGGCGCATCGCCAGGCCGTGGCTGGACGCGCTGTTCCGGCTCTGCGCCGGGCGACCGATGCT
GACACTACTGCAGACGCGCTTGCCGTTGCAGCCGCTGCGGCTGCATCTCCAGCAGCGGCTGGAAGCGTCCGTGGCCGGCG
AGACCTTCGTCGTCCGCTATGCCGACACCCGCTGCCTGCCGCAGTTGTTCGAGGTACTCGCCCCGGCGCAGCGCGCAGCG
TTCCTGGCGTCCATCGACGGGTGGCGGTACGTGGACCGCGCCGGCGCCTTGCAGTCGCTGCCGAAGCAGAGCGCCCATGC
GGCCGCCGCGCTGCCCTTCGTGCTGTCGCCGGATCAGCAACAGGCCCTGCAGACGGTGGCGCTGCCGGACACCCTGATCG
CTTACTTGCGCGAGCGCCAGGACGTGTTCGGCCACCTGTGCGGATCGCCGTCGGCCATCCACCGCTGCGTCCACGCCGTG
CTGGGCGGCCTGGCGGAGACGCCGCAGATATCTGCAAACGCATACCGCCAGGTGCTGGTGGCCCTGGAAGCCGAAGGGCT
GCTCAGCGCTGCCGAGGCGACGCAGGATGCGTGA

Upstream 100 bases:

>100_bases
CGGCGGACGAGTGGTGCCGATTCGCCGCCAGCACGCCGGGCGTGCCGCTATACGGTGGCAAGTATGCCGGCGATGGCGTG
GAGCAGGCATCGCCCTGGCT

Downstream 100 bases:

>100_bases
CGCGATCGCGCACCGTGGCGTTGTCACTGACGTAACGCGCGGCTCGGTGCCGAGACGCCTGCTTGCCATCTGCGGCCTGA
TGCTGATGCTGGCAGGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MHGPGARRIARPWLDALFRLCAGRPMLTLLQTRLPLQPLRLHLQQRLEASVAGETFVVRYADTRCLPQLFEVLAPAQRAA
FLASIDGWRYVDRAGALQSLPKQSAHAAAALPFVLSPDQQQALQTVALPDTLIAYLRERQDVFGHLCGSPSAIHRCVHAV
LGGLAETPQISANAYRQVLVALEAEGLLSAAEATQDA

Sequences:

>Translated_197_residues
MHGPGARRIARPWLDALFRLCAGRPMLTLLQTRLPLQPLRLHLQQRLEASVAGETFVVRYADTRCLPQLFEVLAPAQRAA
FLASIDGWRYVDRAGALQSLPKQSAHAAAALPFVLSPDQQQALQTVALPDTLIAYLRERQDVFGHLCGSPSAIHRCVHAV
LGGLAETPQISANAYRQVLVALEAEGLLSAAEATQDA
>Mature_197_residues
MHGPGARRIARPWLDALFRLCAGRPMLTLLQTRLPLQPLRLHLQQRLEASVAGETFVVRYADTRCLPQLFEVLAPAQRAA
FLASIDGWRYVDRAGALQSLPKQSAHAAAALPFVLSPDQQQALQTVALPDTLIAYLRERQDVFGHLCGSPSAIHRCVHAV
LGGLAETPQISANAYRQVLVALEAEGLLSAAEATQDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21417; Mature: 21417

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGPGARRIARPWLDALFRLCAGRPMLTLLQTRLPLQPLRLHLQQRLEASVAGETFVVRY
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEE
ADTRCLPQLFEVLAPAQRAAFLASIDGWRYVDRAGALQSLPKQSAHAAAALPFVLSPDQQ
CCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH
QALQTVALPDTLIAYLRERQDVFGHLCGSPSAIHRCVHAVLGGLAETPQISANAYRQVLV
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ALEAEGLLSAAEATQDA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHGPGARRIARPWLDALFRLCAGRPMLTLLQTRLPLQPLRLHLQQRLEASVAGETFVVRY
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEE
ADTRCLPQLFEVLAPAQRAAFLASIDGWRYVDRAGALQSLPKQSAHAAAALPFVLSPDQQ
CCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH
QALQTVALPDTLIAYLRERQDVFGHLCGSPSAIHRCVHAVLGGLAETPQISANAYRQVLV
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ALEAEGLLSAAEATQDA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA