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The map label for this gene is yiaA [C]

Identifier: 84624961

GI number: 84624961

Start: 3762012

End: 3764681

Strand: Reverse

Name: yiaA [C]

Synonym: XOO_3304

Alternate gene names: 84624961

Gene position: 3764681-3762012 (Counterclockwise)

Preceding gene: 84624963

Following gene: 84624960

Centisome position: 76.2

GC content: 72.85

Gene sequence:

>2670_bases
ATGCGAACGCGTATTGCCAACCATTCGTCCGTGGCCTTCGTCGGCGCGTTGTGGGTGGGGCTGCTGCTGTTCGGCGTATT
CGCGGCGGTATCGGTACAGAAGAGCGTGCGCGATCGCGTCGACGGCATCGGCGTGACGGCGATCCACCATGGAGAGGCCG
GGTGTTCGGTCGTCGCCGCGCTGTCGCTGCTGACCGTCGGTCTGTGCAACGCGACGCCGCCTCTGAGCGCAAAAATCGTG
GAAGCGGTGTTCGCCGACTACGCGCCGATGGCAAGCTGGCAGTGGAGCGAGGAGACGAGCGCGTTCCTGGCCCAGGCGCG
GCCGCGCAGCTACTGCGTGCAGTACCGCGAGAGCGACCTGGATTTCGTGCAGCGGCTGCTGGCCGAGGAAGGCCTGGGCT
GGCGGCTGCAGGAGGCGGACGCGTCGCCCGGCGGGCACCAGCTGGTGGTGTTCGCCGACAGCGCCGCGCAACCGCAGGAC
CCCAGTTCGGCGCAGGGCGGGGGGCTGCGCTACCACCGCAGCGACGCCACCGAGGCGGCCGACAGCGTGCTGGCGATCGG
CGCCACCCGGCGGCTGGGCAGCGGCCGGCTGACGGTGCTCAGCGAAGACTTCAAGACGCGTCAGGCGCGCAGCGCGCAGT
TGCCGTTGCACGGCGGCGGCAGGCAGTCGCTGCGCGAGGTGTACGAGCCGGTGGGGATGGACGCCTTCGCCAGCGCGCAG
GCAGCAGACCGCTCTGCGGAGTTGATGGCGCAGGCGCACGAGGCGCAGTGGTCACCGTGGCAGGGCCGCAGCACGGTGCG
CACGCTGCGCGCCGGCACCTGGTTCACGCTGACCCAGTCACCGCAGCAGGGCCAGGCGCCGCCGGCGCAGCTGTTGCTGA
CGCGGGTGTGGCATGCGGGTATCAACAACTTGCCGGTGGACGTGCGCGCGGCGGTGCAGTCGCAGTTGGGGGCCGCGCCG
GCGTGGCCGGATGCCAGCGCGGTGGCCGCACGCAGCACCTGGGCGCAGGCCGAGGCGGTGGGCTACGGCAACGCCTTCGA
GGCGGTGGACCGGCAGCAGCCGTGGCGGCCGGTGCTGGCCGACGGCACCGGGGCGCGGCTGCACCCGCGGCCGACCGCGC
CGGGCTACCAGAGCGCCATCGTGGTCGGTGCCGATGGCAGCACCGGCGGCAGCCAGGAGGTCCATGCCGACGCGCTGGGC
CGGATCCGGGTCAGGTTCCACTTCCAGCACGCCGCGTCGGCCCCGGCGGCGCAGGACAGCACGTGGCTGCGGGTGGCGCA
GCGCTACGCCGGCCCGGGCGTGGGCAGCCAGTTCCTGCCGCGCATCGGCCAGGAAGTGCTGGTGGGCTTCCTGGAGGGGG
ACATCGACCGTCCGGTGGTGCTGGGGGCGCTGTACAACGGCAAGGGCGAAGCCGGCGTTCCCGCCACCCCCGGCGGCACC
AGCGCCGAGGCCGACACCGGCCTGTACGCCAAGGCCGGCGACGGCAGACCCAGCGCGCAGGGCAACCTGGCCGGCGGCCA
TGCCCCGGCCTGGCACGGCGCCGGCGGCGGCGCGGACAACCACCGCAACGCCACCGCGCTGTGGGGCGTGCAATCCAAGG
AATGGGGCGGCGCTGGCCACAGCCGGCTGGTGTTCGACGACAGCGACCAGCAATTGCGCTTGCAACTTGCGACCACCCAG
GCAGCCACGCAACTGAACCTGGGGCACCTGATCCACCAGGCGGACAACTACCGCGGCAGCTTCCGCGGGGAAGGCTTCGA
ACTGCGCACCGACGCGTGGGGCGCGGTGCGGGCCAGCTCGGGGCTATGGCTGAGCAGCTACGGCCGCAGCGGCGGCCCGG
CCGGCGAGGCGACCCAGCCCAGCGCATTGCTGAGCCAGCTGCAGACGCTGGGCAAGACGTTCTCGCAGGCGGCGGGCACG
CACCAGACGGTGAAGCTGGCCGCGCACGAAGGCGTGGGCCAGGCGAACCACTCCCAGCTGATCGCCGAGCAGGCGCCGCT
GCCGGCGCTGCTGACCAGCGTGAAGACCACGGTGCCGGGCACGGCCTACGCCGACGCCAAGGGCGCGGCGGCCGAGCGCC
GCGCCAGCCCGGGCGACGACCGGGTGCCGCATACCGGCGATGCGCTGCTGGGCCTGGCCGCACCAGCGGGGATCGGCGTG
GTGGCCGGCCAGGGCCTGAGCTGGAGCGTGGGCGAGACGCTGACGCTGGCCAGCGGCGCGGGCAGCGAAGCGGCCATCGC
CGGCGACGCCCGGCTGCACAGCGGCCAGGCAATCGGCGTGCTGGCCGCGGCGGTGGACGGCCGGCAAACGCAAGCCAACA
GCCTGAGCCTCGTCAGCGGCGAAGGCGCGCTGGACGTGCAGGCGCAGTCGGACGACGTGCGCGTACAGTCGAAAGAAGGG
CTGAAGCTGATCAGCGCCAACGCCGACGTGGCCCTGGCGGCGGGCAAGACCCTCCACCTGGCGGTGGCCGGCGGGGCCAG
CGTGACCATCGAAGGCGGCAACATCACCGTCGCCTGCCCCGGCACCATCACCGTGCATGCGAGCAAGAAGTCGTTCGTGG
GGCCGGTGCAGCATGCGTATCCGTTGCCCGCGTTCGCAAAGTCGGTCTGCATCCCGTGCCTGTTGCAGGCCATGGGCAAG
GGGCACGCGTTGTCCCCGGTGAATGGGTGA

Upstream 100 bases:

>100_bases
GCAATAAAGTCCGTATACCCGTGGTGCTCAATGCGCAGAGTGCGTCTGACACAGGCGTGCCAAGGAAGCGGAAGTCTTCA
TTTTTCCAAGGAGAGTGATC

Downstream 100 bases:

>100_bases
TCGGCATGCACCGCGTCTGGATCGATGTCGCCAGCGATGAAACCAAGGCGGCTACGCACGCGCTGCTTGCAGAGGGGTCT
GCGTCCGATGTCCGCATCGC

Product: putative VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; VgrG Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VGR-Like Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; Vgr Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 889; Mature: 889

Protein sequence:

>889_residues
MRTRIANHSSVAFVGALWVGLLLFGVFAAVSVQKSVRDRVDGIGVTAIHHGEAGCSVVAALSLLTVGLCNATPPLSAKIV
EAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSAAQPQD
PSSAQGGGLRYHRSDATEAADSVLAIGATRRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQ
AADRSAELMAQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAP
AWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALG
RIRVRFHFQHAASAPAAQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGT
SAEADTGLYAKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQ
AATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGT
HQTVKLAAHEGVGQANHSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGV
VAGQGLSWSVGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEG
LKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPVQHAYPLPAFAKSVCIPCLLQAMGK
GHALSPVNG

Sequences:

>Translated_889_residues
MRTRIANHSSVAFVGALWVGLLLFGVFAAVSVQKSVRDRVDGIGVTAIHHGEAGCSVVAALSLLTVGLCNATPPLSAKIV
EAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSAAQPQD
PSSAQGGGLRYHRSDATEAADSVLAIGATRRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQ
AADRSAELMAQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAP
AWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALG
RIRVRFHFQHAASAPAAQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGT
SAEADTGLYAKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQ
AATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGT
HQTVKLAAHEGVGQANHSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGV
VAGQGLSWSVGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEG
LKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPVQHAYPLPAFAKSVCIPCLLQAMGK
GHALSPVNG
>Mature_889_residues
MRTRIANHSSVAFVGALWVGLLLFGVFAAVSVQKSVRDRVDGIGVTAIHHGEAGCSVVAALSLLTVGLCNATPPLSAKIV
EAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSAAQPQD
PSSAQGGGLRYHRSDATEAADSVLAIGATRRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQ
AADRSAELMAQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAP
AWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALG
RIRVRFHFQHAASAPAAQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGT
SAEADTGLYAKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQ
AATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGT
HQTVKLAAHEGVGQANHSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGV
VAGQGLSWSVGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEG
LKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPVQHAYPLPAFAKSVCIPCLLQAMGK
GHALSPVNG

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91845; Mature: 91845

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRIANHSSVAFVGALWVGLLLFGVFAAVSVQKSVRDRVDGIGVTAIHHGEAGCSVVAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
LSLLTVGLCNATPPLSAKIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCH
DFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSAAQPQDPSSAQGGGLRYHRSDATEAA
HHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHH
DSVLAIGATRRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQ
HHEEEEECHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
AADRSAELMAQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCC
INNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLA
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEE
DGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDS
CCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCEEEEEEEEEHHCCCCCCCCH
TWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
SAEADTGLYAKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGH
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
SRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASS
CEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCC
GLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQL
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH
IAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGV
HHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEE
VAGQGLSWSVGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSG
EECCCCCCCCCCEEEEECCCCCCCEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEEC
EGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACP
CCCEEEEECCCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECC
GTITVHASKKSFVGPVQHAYPLPAFAKSVCIPCLLQAMGKGHALSPVNG
CEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRTRIANHSSVAFVGALWVGLLLFGVFAAVSVQKSVRDRVDGIGVTAIHHGEAGCSVVAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
LSLLTVGLCNATPPLSAKIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDL
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCH
DFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSAAQPQDPSSAQGGGLRYHRSDATEAA
HHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHH
DSVLAIGATRRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQ
HHEEEEECHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
AADRSAELMAQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCC
INNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLA
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEE
DGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDS
CCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCEEEEEEEEEHHCCCCCCCCH
TWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC
SAEADTGLYAKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGH
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
SRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASS
CEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCC
GLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQL
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH
IAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGV
HHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEE
VAGQGLSWSVGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSG
EECCCCCCCCCCEEEEECCCCCCCEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEEC
EGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACP
CCCEEEEECCCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECC
GTITVHASKKSFVGPVQHAYPLPAFAKSVCIPCLLQAMGKGHALSPVNG
CEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA