| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624942
Identifier: 84624942
GI number: 84624942
Start: 3734860
End: 3735765
Strand: Reverse
Name: 84624942
Synonym: XOO_3285
Alternate gene names: NA
Gene position: 3735765-3734860 (Counterclockwise)
Preceding gene: 84624943
Following gene: 84624941
Centisome position: 75.62
GC content: 62.25
Gene sequence:
>906_bases GTGAATACACCGCCCGCGCGGCAGATTTCGCCGGTGCAGGGACGATGGGGGCCGCCTGACGTGAACGCATGGGATCTCAC CGAAAACACGTTCCTTGCATACGATTTCGCCATCCTCAATCCCATTCAACTGGATGGGATCCTCTGGCAAGACCTCCCCA ATACCGCGATCGTCCCGTTACGTTACAGGTCGCAGGAGCAGCTGTTCCCGCGTTTGATCGCGCTCGGCCAATTGGATCGG CAAGCGCGCATGGATCTGTTCCAACGCCATCTGTCGCTGGGTTCCGCTGCGCAAACCGACTACTTCTGCCTGCTGCTGCG TTGCTCGCTGCCAGGTGCGGATGTGGCCAGGCATTTCGCGCGCCAGATGGAGCAGTACGACCCGCGCAGGATGCAGCAGG ATGTCCTGCGCTTGCATGATCCAAGAGTGCTGAGGCATCTGGACTGGATCTTGACGCAGGCGCAATGGGACAACGTGCTG GGCCCCATCGAGCGGGTCGCATGGCCGTTGGCAGCGCTGCAATGGGTGCATCGGGATCATGACGCCACCGCGCACACCTC GTCGAACCGCCTGGTCCTTGCCGAGCACCAATGGGCCCAGGTAGTGCGGTTGGCGGAGGTCAATCAATGCCTGCTCGTTC TGCAGCGGCGGTTGCCCGATCTTGAAGTGCAGGCAAGCGTTTCGGCACGCGTGGACCGCTTGCTTGCTAAGGCAGCGCAA GTGCATGGACTGCAGGACCGCGCCGATCGCATCCTGTTCGTGGAGCAGGCGTTCCAGTTTGGAGACCAGATCCATGGCCA ACCCGTACTGCGCGAGGCCCTTGCGCGTGCCGGTGGCGGCGAAGCGTCTTACATCGGCCTGTGCGCCGAGATGATGGAGC CGCTGCAACAGCGGCCGGGTACATAA
Upstream 100 bases:
>100_bases GCGCCGGGGGTGGTCGCGTTCAAGGGCGGGCAGCAGGTGTTGACGGGGCCGCAGGGGGCATCCATGAGCCCCGTGACGCC ATCCGCCAGCCACAAGCTGT
Downstream 100 bases:
>100_bases CCAGAAGGGAGGCCAAGAATGAACGTATCGGTCGGAAAGATGGAGCAAGTCAACTGCCAGTTCTGCAACAAGCAAGGACT GCCGATTCTTCCACTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT
Sequences:
>Translated_301_residues MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT >Mature_301_residues MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34311; Mature: 34311
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHCCHHCCCCHHCCCCCCEEEEE RYRSQEQLFPRLIALGQLDRQARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFA EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHHHHHHH RQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVLGPIERVAWPLAALQWVHRDH HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPG HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC T C >Mature Secondary Structure MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPL CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHCCHHCCCCHHCCCCCCEEEEE RYRSQEQLFPRLIALGQLDRQARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFA EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHHHHHHH RQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVLGPIERVAWPLAALQWVHRDH HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPG HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA