Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624942

Identifier: 84624942

GI number: 84624942

Start: 3734860

End: 3735765

Strand: Reverse

Name: 84624942

Synonym: XOO_3285

Alternate gene names: NA

Gene position: 3735765-3734860 (Counterclockwise)

Preceding gene: 84624943

Following gene: 84624941

Centisome position: 75.62

GC content: 62.25

Gene sequence:

>906_bases
GTGAATACACCGCCCGCGCGGCAGATTTCGCCGGTGCAGGGACGATGGGGGCCGCCTGACGTGAACGCATGGGATCTCAC
CGAAAACACGTTCCTTGCATACGATTTCGCCATCCTCAATCCCATTCAACTGGATGGGATCCTCTGGCAAGACCTCCCCA
ATACCGCGATCGTCCCGTTACGTTACAGGTCGCAGGAGCAGCTGTTCCCGCGTTTGATCGCGCTCGGCCAATTGGATCGG
CAAGCGCGCATGGATCTGTTCCAACGCCATCTGTCGCTGGGTTCCGCTGCGCAAACCGACTACTTCTGCCTGCTGCTGCG
TTGCTCGCTGCCAGGTGCGGATGTGGCCAGGCATTTCGCGCGCCAGATGGAGCAGTACGACCCGCGCAGGATGCAGCAGG
ATGTCCTGCGCTTGCATGATCCAAGAGTGCTGAGGCATCTGGACTGGATCTTGACGCAGGCGCAATGGGACAACGTGCTG
GGCCCCATCGAGCGGGTCGCATGGCCGTTGGCAGCGCTGCAATGGGTGCATCGGGATCATGACGCCACCGCGCACACCTC
GTCGAACCGCCTGGTCCTTGCCGAGCACCAATGGGCCCAGGTAGTGCGGTTGGCGGAGGTCAATCAATGCCTGCTCGTTC
TGCAGCGGCGGTTGCCCGATCTTGAAGTGCAGGCAAGCGTTTCGGCACGCGTGGACCGCTTGCTTGCTAAGGCAGCGCAA
GTGCATGGACTGCAGGACCGCGCCGATCGCATCCTGTTCGTGGAGCAGGCGTTCCAGTTTGGAGACCAGATCCATGGCCA
ACCCGTACTGCGCGAGGCCCTTGCGCGTGCCGGTGGCGGCGAAGCGTCTTACATCGGCCTGTGCGCCGAGATGATGGAGC
CGCTGCAACAGCGGCCGGGTACATAA

Upstream 100 bases:

>100_bases
GCGCCGGGGGTGGTCGCGTTCAAGGGCGGGCAGCAGGTGTTGACGGGGCCGCAGGGGGCATCCATGAGCCCCGTGACGCC
ATCCGCCAGCCACAAGCTGT

Downstream 100 bases:

>100_bases
CCAGAAGGGAGGCCAAGAATGAACGTATCGGTCGGAAAGATGGAGCAAGTCAACTGCCAGTTCTGCAACAAGCAAGGACT
GCCGATTCTTCCACTGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR
QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL
GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ
VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT

Sequences:

>Translated_301_residues
MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR
QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL
GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ
VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT
>Mature_301_residues
MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPLRYRSQEQLFPRLIALGQLDR
QARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFARQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVL
GPIERVAWPLAALQWVHRDHDATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ
VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34311; Mature: 34311

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPL
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHCCHHCCCCHHCCCCCCEEEEE
RYRSQEQLFPRLIALGQLDRQARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFA
EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHHHHHHH
RQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVLGPIERVAWPLAALQWVHRDH
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ
CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPG
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
T
C
>Mature Secondary Structure
MNTPPARQISPVQGRWGPPDVNAWDLTENTFLAYDFAILNPIQLDGILWQDLPNTAIVPL
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEHHHHHCCHHCCCCHHCCCCCCEEEEE
RYRSQEQLFPRLIALGQLDRQARMDLFQRHLSLGSAAQTDYFCLLLRCSLPGADVARHFA
EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHHHHHHH
RQMEQYDPRRMQQDVLRLHDPRVLRHLDWILTQAQWDNVLGPIERVAWPLAALQWVHRDH
HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DATAHTSSNRLVLAEHQWAQVVRLAEVNQCLLVLQRRLPDLEVQASVSARVDRLLAKAAQ
CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
VHGLQDRADRILFVEQAFQFGDQIHGQPVLREALARAGGGEASYIGLCAEMMEPLQQRPG
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA