| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624941
Identifier: 84624941
GI number: 84624941
Start: 3731974
End: 3734841
Strand: Reverse
Name: 84624941
Synonym: XOO_3284
Alternate gene names: NA
Gene position: 3734841-3731974 (Counterclockwise)
Preceding gene: 84624942
Following gene: 84624940
Centisome position: 75.6
GC content: 64.64
Gene sequence:
>2868_bases ATGAACGTATCGGTCGGAAAGATGGAGCAAGTCAACTGCCAGTTCTGCAACAAGCAAGGACTGCCGATTCTTCCACTGCG CTATGCGGTGGCGCGCAAGGGCATGGGCGATGCTCCCGCGGTGACGGCGCCCTTTGTCGTGGCCGAGAAGGAGCAGAAAA AGGAAGATTTTTCGCTTCCTGACGATATCGCCAGCTACACGCTTCGCCTGCTGCGGGAAGGCTATCTCTACGTCTACGAC GAACTGCGCAAGGAGTGGTCCGCCTACGTGGTGACCTCTGGCGGCTACCTGTTTGCATTCGACCCCCATGGCAAGGCACC GCCAGGCGGATGGGGCAAGGTCGAGTTCAACTGTTCCCGTGGCGGCGATGCGTTCATTGCACGCTGCATCACGGTCAAGG ATGCGGCACGCGCCACCAAGGTATGGCTGGGGTTCTCGGATGTGACGTGGAAAGCGGCCGTGCTGCAGAAGCACGCCGAT GCCGCCTACCGACAAGCGCATATGCGCTGCCTGGACATCGCCCAATGGCGCGCTGGCGGGCAGCTGCAACATGCCAGCGA CTTTGCCGAGCTTGCCAGCCGCGTGGCCGAGTACGCGACCACGCCAGAGCAGCTGCTTGCCCAGACCCGGGCCTATGTCA AAACGCTGCTGCCGGTGCCGCTCAAGACCGTCGGCGAGCTGCGCGGTGCCGATGCCTTGGCAACGCGCGCCCGCGAGTCG AGTTCACGGCTGCTGCAGCAACTGCTGCCGGTGGCGGCCGGCGGCGTTGCCGCCCACAAGGGCCGGGTGACCTCGGCAAC CTGGGCGTTCTCCACCCAACCGTTCTTCGCCGACGGCAACGATGCCGCCGCCATGCTGACCTGGGCTGCGCAGACAGCCG CACCGTTGCGGCCGGCCTTGGTCGCGTTGGACGATCCGGCCGGGGTGGCCATGGAGCTCAACGGCCTGGCCCTGCAGCGC AGCATGGAGTTCAGCGAGAACCCGCAGCGCAAGTGGAAGCATGAAACGGCGGTGTTGATCGATGCGCTGCAGGAGGCGGT CAAGCACGGCGCGGTCGAGGATGAAGTGCGTTGGCAGCGGGCCGCCTCGCGCACCGCCGAAGGCATCGCGAACATCGACG ACGCCCAGGATCTTCCCGATGCGACCTCCTACCTGTGGACCACTATGACGCAAGGATCGGATGTCGCCTTGCGTGAGCAG ACCGCCCGGCGCGCGCAGCGCGAGCGCGCACGTGCCCAGGACGATGCAAGGATCCGCGAGCAAGCCGACGCGAATGCCTC CGCACTGGGGCGGGAAGCGTGGAAGACATACACCAAGTACTTCGATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGT ATCCCCAGCAGCTGGAGCACTTCGGGCGCGAGGTGCTGGCCAGGCTGGACCCGCCCTACCTCGCCTGGCTCAAGAGTCCC TCGTTGACGACCTACCTGACCCACACCTTCGACGAGCACGATCTCGACAGCGGTGCCTCCTATACGGCCCTGGCGACCCA ACTGCTGCACCATGCCAGCGGCCGTGGCGCGGTGTTCGACTACCTGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCG AGGCCTGGGTGGCGCGGGCGTTGGCGCTCAATCACGCGCCGCTGATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGC AGCGAGCGCGAGCCATTCCTGCCGGAGTTCGTGGAGAAGTTCCACGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAA GGGGGAATTGAACCGGCCGATGGTGGATGCGGTGGCGCGCTTCATGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGG GGTCCGCGCTGGATCACGGCATGGCGTTTGCGGCCCTGCCGCTGCCGTCGAAATGGCAGCTGGGCTTGTTGGGCGCGGTG GCGCGCGCGGAGACGCCGACCCTGCGGATGGTGGATCTGCGCGGCACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGC CAATCTGGTGTCCTCGCTGGGCGCCGGGCCGGCGGGCGCGGCGCGCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGG ACACGGCCGAGCGCTATCCGTTCCGGGCGGTGATGCTGGTGGACGAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGT GCGGCGCTGAAGGCCGGCATGGCCGAGGCGCTGAGCGCGCGGGAATTCGATGACGTGATGCAGGAATCGGTGGGCAAGCT GGCCAGCCTGGAAGTGAAGGTGGCGGTGGTGCAGGCGATCCTGTCGTCGATCACGCTGTATCTGTCGTACGGCAAACTGA TGAAGGCCGAGGAGGACAAGGTGTGGAGCGAACGGATCAACGTGGCCGGCGGGGTGATCGGATTGGTGGGTGGATTGACC GAAGCCACCGGCACTGTGCTGGAGAAGACCCCCTGGGGCCAGACCCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGT GATCGAGAGCCGTGCGGGTTGGTTTACCGGCACCGGCAAGCTGATGGGCGTGGTGGGCGGGGTGATTGGGGGGGTGTTGG CGATTAAGGATGGTATAGAGACCTTTAAAAAGCACCAGGTTATTGGTGGTTTGCTGGCGACTCTAGGAGCGGCGTCTTTG ATTGCAGCGATGATGCTGATATTTACTGCGACGGCGGGAATAGGGCTTATAGTTGGATTGATAATCGCAGCGCTAATGGC GGTTGTCTATTGGATCAAGCCCAATGCTCTCCAAGATTGGTTGGTTGATACTCAGTATGGAAAGGCGGATGAAGGTGGAG GTGCTCCATCTTCATTCAAAGGTCTAGCGCAGCAGCAAATTGCGCTTGAAGCTCTAAGTAAGGCATAA
Upstream 100 bases:
>100_bases GCGTGCCGGTGGCGGCGAAGCGTCTTACATCGGCCTGTGCGCCGAGATGATGGAGCCGCTGCAACAGCGGCCGGGTACAT AACCAGAAGGGAGGCCAAGA
Downstream 100 bases:
>100_bases GCTATGTACACGGGATGGATAAAGAAATTTCCAAAAGAATGGAAGCTAACATCGAATGAAGATGCTAATAAGCTATCATC GAATGGCGATGGCGATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane Anchored Protein
Number of amino acids: Translated: 955; Mature: 955
Protein sequence:
>955_residues MNVSVGKMEQVNCQFCNKQGLPILPLRYAVARKGMGDAPAVTAPFVVAEKEQKKEDFSLPDDIASYTLRLLREGYLYVYD ELRKEWSAYVVTSGGYLFAFDPHGKAPPGGWGKVEFNCSRGGDAFIARCITVKDAARATKVWLGFSDVTWKAAVLQKHAD AAYRQAHMRCLDIAQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARES SSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQR SMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQ TARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSP SLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKG SEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAV ARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGG AALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLT EATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETFKKHQVIGGLLATLGAASL IAAMMLIFTATAGIGLIVGLIIAALMAVVYWIKPNALQDWLVDTQYGKADEGGGAPSSFKGLAQQQIALEALSKA
Sequences:
>Translated_955_residues MNVSVGKMEQVNCQFCNKQGLPILPLRYAVARKGMGDAPAVTAPFVVAEKEQKKEDFSLPDDIASYTLRLLREGYLYVYD ELRKEWSAYVVTSGGYLFAFDPHGKAPPGGWGKVEFNCSRGGDAFIARCITVKDAARATKVWLGFSDVTWKAAVLQKHAD AAYRQAHMRCLDIAQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARES SSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQR SMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQ TARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSP SLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKG SEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAV ARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGG AALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLT EATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETFKKHQVIGGLLATLGAASL IAAMMLIFTATAGIGLIVGLIIAALMAVVYWIKPNALQDWLVDTQYGKADEGGGAPSSFKGLAQQQIALEALSKA >Mature_955_residues MNVSVGKMEQVNCQFCNKQGLPILPLRYAVARKGMGDAPAVTAPFVVAEKEQKKEDFSLPDDIASYTLRLLREGYLYVYD ELRKEWSAYVVTSGGYLFAFDPHGKAPPGGWGKVEFNCSRGGDAFIARCITVKDAARATKVWLGFSDVTWKAAVLQKHAD AAYRQAHMRCLDIAQWRAGGQLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARES SSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPALVALDDPAGVAMELNGLALQR SMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQ TARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSP SLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPLIQASWEEAARKG SEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAV ARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGG AALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINVAGGVIGLVGGLT EATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGIETFKKHQVIGGLLATLGAASL IAAMMLIFTATAGIGLIVGLIIAALMAVVYWIKPNALQDWLVDTQYGKADEGGGAPSSFKGLAQQQIALEALSKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103468; Mature: 103468
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSVGKMEQVNCQFCNKQGLPILPLRYAVARKGMGDAPAVTAPFVVAEKEQKKEDFSLP CCCCCCCCHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC DDIASYTLRLLREGYLYVYDELRKEWSAYVVTSGGYLFAFDPHGKAPPGGWGKVEFNCSR HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEECCC GGDAFIARCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGG CCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARES CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH SSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPAL HHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEE VALDDPAGVAMELNGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVRWQR EEECCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIRE HHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH QADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSP HHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCC SLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARA CCEEHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVAR HHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHH FMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFS HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHH EATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGG HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHEECCCCC AALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VWSERINVAGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCEECCCHH LMGVVGGVIGGVLAIKDGIETFKKHQVIGGLLATLGAASLIAAMMLIFTATAGIGLIVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAALMAVVYWIKPNALQDWLVDTQYGKADEGGGAPSSFKGLAQQQIALEALSKA HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVSVGKMEQVNCQFCNKQGLPILPLRYAVARKGMGDAPAVTAPFVVAEKEQKKEDFSLP CCCCCCCCHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC DDIASYTLRLLREGYLYVYDELRKEWSAYVVTSGGYLFAFDPHGKAPPGGWGKVEFNCSR HHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCEEEEECCC GGDAFIARCITVKDAARATKVWLGFSDVTWKAAVLQKHADAAYRQAHMRCLDIAQWRAGG CCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLQHASDFAELASRVAEYATTPEQLLAQTRAYVKTLLPVPLKTVGELRGADALATRARES CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH SSRLLQQLLPVAAGGVAAHKGRVTSATWAFSTQPFFADGNDAAAMLTWAAQTAAPLRPAL HHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEE VALDDPAGVAMELNGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVRWQR EEECCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AASRTAEGIANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIRE HHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH QADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSP HHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCC SLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARA CCEEHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVAR HHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHH FMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFS HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHH EATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGG HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHEECCCCC AALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH VWSERINVAGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGK HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCEECCCHH LMGVVGGVIGGVLAIKDGIETFKKHQVIGGLLATLGAASLIAAMMLIFTATAGIGLIVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAALMAVVYWIKPNALQDWLVDTQYGKADEGGGAPSSFKGLAQQQIALEALSKA HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA