| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624939
Identifier: 84624939
GI number: 84624939
Start: 3728990
End: 3730960
Strand: Reverse
Name: 84624939
Synonym: XOO_3282
Alternate gene names: NA
Gene position: 3730960-3728990 (Counterclockwise)
Preceding gene: 84624940
Following gene: 84624938
Centisome position: 75.52
GC content: 63.98
Gene sequence:
>1971_bases TTGGGGCAAGAAATAACGTGGCTGAATCGCGCCGCATCACGGTACGGCCTGGCCCTGCAGCGCAGCATGGAGTTCAGCGA GAACCCGCAGCGCAAGTGGAAGCATGAAACGGCGGTGTTGATCGATGCGCTGCAGGAGGCGGTCAAGCACGGCGCGGTCG AGGATGAAGTGCATGCGCAGATCGCCGCCTCGCGCACCGCCGAAGGCATCGCGAACATCGACGACGCCCAGGATCTTCCC GATGCGACCTCCTACCTGTGGACCACCATGACGCAAGGATCGGAGGTCGCCTTGCGTGAGCAGACCGCCCGGCGCGCGCA GCGCGAGCGCGCACGTGCCCAGGACGATGCAAGGATCCGCGAGCAAGCCGACGCGAACGCCCCCGCACTGGGACGGGAAG CGTGGAAGACATACACCAAGTACTTCGATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGTATCCCCAGCAGCTGGAG CACTTCGGGCGCGAGGTGCTGGCCAGGCTGGATCCGCCCTACCTCGCCTGGCTCAAGAGTCCCTCGTTGACGACCTACCT GACCCACACCTTCGACGAGCACGATCTCGACAGCGGTGCCTCCTATACAGCCCTGGCGACCCAACTGCTGCACCATGCCA GCGGCCGTGGCGCGGTGTTCGACTACCTGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCGAGGCCTGGGTGGCGCGT GCGTTGGCGCTCAATCACGCGCCGCTGATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGCAGCGAGCGCGAGCCGTT CCTGCCGGAGTTCGTGGAGAAGTTCCACGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAAGGGGGAATTGAACCGGC CGATGGTGGATGCGGTGGCGCGCTTCATGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGGGGTCCGCGCTGGATCAC GGCATGGCGTTTGCGGCCCTGCCGCTGCCGTCGAAATGGCAGCTGGGCTTGTTGGGCGCGGTGGCGCGCGCGGAGACGCC GACCCTGCGGATGGTGGATCTGCGCGGCACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGCCAATCTGGTGTCCTCGC TGGGCGCCGGGCCGGCGGGCGCGGCGCGCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGGACACGGCCGAGCGCTAT CCGTTCCGGGCGGTGATGCTGGTGGACGAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGTGCGGCGCTGAAGGCCGG CATGGCCGAGGCGCTGAGCGCGCGGGAATTCGATGACGTGATGCAGGAGTCGGTGGGCAAGCTGGCCAGCCTGGAAGTGA AGGTGGCGGTGGTGCAGGCGATCCTGTCGTCGATCACGCTGTATCTGTCGTACGGCAAACTGATGAAGGCCGAGGAGGAC AAGGTGTGGAGCGAACGGGGCAACGTGGCCGGCGGGGTGATCGGATTGGTGGGGGGATTGACCGAAGCCACCGGTAATGT GCTGGAGAAGACCCCCTGGGGCCAGACCCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGTGATCGAGAGCCGTGCGG GGTGGTTTACCGGCATGGGCAAGCTGATGGGCGTGGTGGGTGGGGTGATTGGGGGGATTTTGGCGATTAAGGATGGCTGG CAAACTGTTGGTAAACACCCTTTATTGGGCACTGTTATACTTATTCTGGGTGCCGCATCAATCGGCGCAGCGATTATGTT GGTTTTTACTGCAACAGCTGGTGTTGGATTGATTTTGGGGATTCTTATTGCCATTCTTATGGCTGTTGTTTATTGGCTGA AGCCAAATGCAATACAGGATTGGTTGGTAGACACGCAGTATGGCCTTATCGATCAAGGAGGCGGTACGGTGTCTTCTTTC AAAGGCTTGGCTCAGCAGCAGATTTCCCTTGAAGCACTTGCAAAAGGTTGA
Upstream 100 bases:
>100_bases TCACCACCGTGCCTGGGTTGATGTCCTATGCGATCCGCAAGGCGCAAGGCATCCGGACACCGCCCGATGTGCCCGGCGAT CTTGCATCGCAGTTCAAGGA
Downstream 100 bases:
>100_bases GGTATAGGAATGTATACTGGATGGATAAAGCCCTTCCCGAAAGGTGTGAGATTTTCCGAAGATGATCGTGCTCGGGAGTT AATCAGGGGCTTTGATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MGQEITWLNRAASRYGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLP DATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIREQADANAPALGREAWKTYTKYFDEPAQRRVVDQEYPQQLE HFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVAR ALALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDH GMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERY PFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEED KVWSERGNVAGGVIGLVGGLTEATGNVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGMGKLMGVVGGVIGGILAIKDGW QTVGKHPLLGTVILILGAASIGAAIMLVFTATAGVGLILGILIAILMAVVYWLKPNAIQDWLVDTQYGLIDQGGGTVSSF KGLAQQQISLEALAKG
Sequences:
>Translated_656_residues MGQEITWLNRAASRYGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLP DATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIREQADANAPALGREAWKTYTKYFDEPAQRRVVDQEYPQQLE HFGREVLARLDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVAR ALALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDH GMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERY PFRAVMLVDEAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEED KVWSERGNVAGGVIGLVGGLTEATGNVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGMGKLMGVVGGVIGGILAIKDGW QTVGKHPLLGTVILILGAASIGAAIMLVFTATAGVGLILGILIAILMAVVYWLKPNAIQDWLVDTQYGLIDQGGGTVSSF KGLAQQQISLEALAKG >Mature_655_residues GQEITWLNRAASRYGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVHAQIAASRTAEGIANIDDAQDLPD ATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIREQADANAPALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEH FGREVLARLDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARA LALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHG MAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYP FRAVMLVDEAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDK VWSERGNVAGGVIGLVGGLTEATGNVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGMGKLMGVVGGVIGGILAIKDGWQ TVGKHPLLGTVILILGAASIGAAIMLVFTATAGVGLILGILIAILMAVVYWLKPNAIQDWLVDTQYGLIDQGGGTVSSFK GLAQQQISLEALAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71080; Mature: 70949
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQEITWLNRAASRYGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVHAQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIR HHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH EQADANAPALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKS HHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC PSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVAR CCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH ALALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVA HHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHH RFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSF HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCH SEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSG HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHEECCCC GAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEED CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVWSERGNVAGGVIGLVGGLTEATGNVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGMG HHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHH KLMGVVGGVIGGILAIKDGWQTVGKHPLLGTVILILGAASIGAAIMLVFTATAGVGLILG HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIAILMAVVYWLKPNAIQDWLVDTQYGLIDQGGGTVSSFKGLAQQQISLEALAKG HHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GQEITWLNRAASRYGLALQRSMEFSENPQRKWKHETAVLIDALQEAVKHGAVEDEVHAQ CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAASRTAEGIANIDDAQDLPDATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIR HHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHH EQADANAPALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKS HHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC PSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVAR CCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH ALALNHAPLIQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVA HHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHH RFMYQLTGPLVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSF HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCH SEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSG HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHEECCCC GAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEED CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVWSERGNVAGGVIGLVGGLTEATGNVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGMG HHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEEEEEEEECCCCHHHHHH KLMGVVGGVIGGILAIKDGWQTVGKHPLLGTVILILGAASIGAAIMLVFTATAGVGLILG HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIAILMAVVYWLKPNAIQDWLVDTQYGLIDQGGGTVSSFKGLAQQQISLEALAKG HHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA