| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624940
Identifier: 84624940
GI number: 84624940
Start: 3730945
End: 3731970
Strand: Reverse
Name: 84624940
Synonym: XOO_3283
Alternate gene names: NA
Gene position: 3731970-3730945 (Counterclockwise)
Preceding gene: 84624941
Following gene: 84624939
Centisome position: 75.54
GC content: 52.24
Gene sequence:
>1026_bases ATGTACACGGGATGGATAAAGAAATTTCCAAAAGAATGGAAGCTAACATCGAATGAAGATGCTAATAAGCTATCATCGAA TGGCGATGGCGATTCAATGCCTTCTCAGCGGCTTGGATTGATTAGAATAAATTCCGTTTATATTGACTGGATTGACAGAA GGTTTCTATATAGAGGAATGCTTAATACATCAATCCTTCTGGCTGGCTGCTTAATGATGATTTTGCTTGTTTTTATATTC ACAAGGCTCATGCTTGGTGCTGCTGGGTCGGGAAGATTTATTATGATTCTTCCTATTTTGACTGCGGTTTCCGGAATTTT ATTGTTTTTTAATGTATTCCTTAAGCTTGAATTTTTTACCCACATCTACTACCCAATCCGCTTCAACCGCAAAACCCGAA AAATCTACGTCTTCCGCGAAAAGCGCGACGGCGGCTTGCTGATCGTTCCCTGGGAGGAGGTCTTCTTCCATATCGGTCGC GGCACCGACATGAAATTCCTCCGCGACATCCGCGGCGAGATTCTCGACGGCGATATCGTCAAGGACACCTTCGCCCTGGG CCACTGCGCCGAGCGCGACGAACCGGTCAAGGAGATGTGGGAGTTCATCCGCCGCTACATGGAGGAAGGCCCGGAGGCGG TCTCCGAGCATCCATTGGACAAGTACGTCGAGCTATCGGTCGCGCCGACCTGGAAGAACTGCCTGATTTCCGCCGTCGGC TTCACCAATGCCACCACGCCGTTCAAGCGCGTGCTGCTCTTCCCCTTCATCGGCACCTTCACCGTCGTGCGCTGGCTGGT GTTCAAGAGCTGCAAGCAACCGGTCTTCCCGCCGGAAGTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCT GGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCACCGTGCCTGGGTTGATGTCCTATGCGATCCGCAAGGCGCAAGGC ATCCGGACACCGCCCGATGTGCCCGGCGATCTTGCATCGCAGTTCAAGGATTGGGGCAAGAAATAA
Upstream 100 bases:
>100_bases TCAGTATGGAAAGGCGGATGAAGGTGGAGGTGCTCCATCTTCATTCAAAGGTCTAGCGCAGCAGCAAATTGCGCTTGAAG CTCTAAGTAAGGCATAAGCT
Downstream 100 bases:
>100_bases CGTGGCTGAATCGCGCCGCATCACGGTACGGCCTGGCCCTGCAGCGCAGCATGGAGTTCAGCGAGAACCCGCAGCGCAAG TGGAAGCATGAAACGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MYTGWIKKFPKEWKLTSNEDANKLSSNGDGDSMPSQRLGLIRINSVYIDWIDRRFLYRGMLNTSILLAGCLMMILLVFIF TRLMLGAAGSGRFIMILPILTAVSGILLFFNVFLKLEFFTHIYYPIRFNRKTRKIYVFREKRDGGLLIVPWEEVFFHIGR GTDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVSEHPLDKYVELSVAPTWKNCLISAVG FTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQG IRTPPDVPGDLASQFKDWGKK
Sequences:
>Translated_341_residues MYTGWIKKFPKEWKLTSNEDANKLSSNGDGDSMPSQRLGLIRINSVYIDWIDRRFLYRGMLNTSILLAGCLMMILLVFIF TRLMLGAAGSGRFIMILPILTAVSGILLFFNVFLKLEFFTHIYYPIRFNRKTRKIYVFREKRDGGLLIVPWEEVFFHIGR GTDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVSEHPLDKYVELSVAPTWKNCLISAVG FTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQG IRTPPDVPGDLASQFKDWGKK >Mature_341_residues MYTGWIKKFPKEWKLTSNEDANKLSSNGDGDSMPSQRLGLIRINSVYIDWIDRRFLYRGMLNTSILLAGCLMMILLVFIF TRLMLGAAGSGRFIMILPILTAVSGILLFFNVFLKLEFFTHIYYPIRFNRKTRKIYVFREKRDGGLLIVPWEEVFFHIGR GTDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVSEHPLDKYVELSVAPTWKNCLISAVG FTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQG IRTPPDVPGDLASQFKDWGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39237; Mature: 39237
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTGWIKKFPKEWKLTSNEDANKLSSNGDGDSMPSQRLGLIRINSVYIDWIDRRFLYRGM CCCCHHHHCCHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHH LNTSILLAGCLMMILLVFIFTRLMLGAAGSGRFIMILPILTAVSGILLFFNVFLKLEFFT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH HIYYPIRFNRKTRKIYVFREKRDGGLLIVPWEEVFFHIGRGTDMKFLRDIRGEILDGDIV HEEEEEEECCCEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH KDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVSEHPLDKYVELSVAPTWKNCLISAVG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEECCCHHHHHHHHHC FTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCHHH GEFVTTVPGLMSYAIRKAQGIRTPPDVPGDLASQFKDWGKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MYTGWIKKFPKEWKLTSNEDANKLSSNGDGDSMPSQRLGLIRINSVYIDWIDRRFLYRGM CCCCHHHHCCHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHH LNTSILLAGCLMMILLVFIFTRLMLGAAGSGRFIMILPILTAVSGILLFFNVFLKLEFFT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH HIYYPIRFNRKTRKIYVFREKRDGGLLIVPWEEVFFHIGRGTDMKFLRDIRGEILDGDIV HEEEEEEECCCEEEEEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCHHH KDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVSEHPLDKYVELSVAPTWKNCLISAVG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEEECCCHHHHHHHHHC FTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCHHH GEFVTTVPGLMSYAIRKAQGIRTPPDVPGDLASQFKDWGKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA