Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624938

Identifier: 84624938

GI number: 84624938

Start: 3727958

End: 3728980

Strand: Reverse

Name: 84624938

Synonym: XOO_3281

Alternate gene names: NA

Gene position: 3728980-3727958 (Counterclockwise)

Preceding gene: 84624939

Following gene: 84624937

Centisome position: 75.48

GC content: 53.57

Gene sequence:

>1023_bases
ATGTATACTGGATGGATAAAGCCCTTCCCGAAAGGTGTGAGATTTTCCGAAGATGATCGTGCTCGGGAGTTAATCAGGGG
CTTTGATAATTCCTCAATGGCCGCTCAGCGCCTATCGTTGATTTCAATAAATTCCACTTATATCGACTGGATTGATCGTA
GATTTTTGTATAGGGGCATGTTGAACATGTCCATTGTTTTTATTGGTGTCATCGGCTTTTTGATATTTTCATTGGTTTGC
TTGTTCAAAATGTTCGAGGCTGGTAGGACGGTTCTTGCTTTTGCGACTGTTGCAGCGTTTTCCGCATTTATGGGGTTTTT
GCTTTATTCGCTCTTGCTTAAGAACGAATTTTTCCGGTACGTGTACTACCCAATCCGCTTCAACCGCAAAACCCGCAAAA
TCTACGTCTTCCGCGAAAAACGCGACGGCGGCTTGCTGATCGTTCCCTGGGACGAGGTGTTCTTCCATATCGGTCGCGGC
ACCGACATGAAGTTCCTCCGCGATATCCGTGGCGAGATTCTCGATGGCGATATCGTCAAGGACACCTTCGCCTTGGGCCA
TTGCGCCGAGCGCGACGAACCGGTCAAGGAGATGTGGGAGTTCATCCGCCGCTACATGGAGGAAGGCCCGGAGGCGGTCG
CAGAGCATCCATTGGACAAGTATGTCGAGCTATCGGTCGCGCCGACCTGGAAGAACTGCCTGATTTCCGCCGTCGGCTTC
ACCAATGCCACCACGCCGTTCAAGCGCGTGCTGCTCTTCCCCTTCATCGGCACCTTCACCGTCGTGCGCTGGCTGGTGTT
CAAGAGCTGCAAGCAACCGGTCTTCCCGCCGGAAGTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCTGGC
CGATCCCCAACTCGATAGGCGAGTTCGTCACCACCGTGCCGGGCTTGATGTCCTATGCGATCCGCAAGGCGCAGGGCATC
AAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGCAAGAAGTAA

Upstream 100 bases:

>100_bases
TGGCCTTATCGATCAAGGAGGCGGTACGGTGTCTTCTTTCAAAGGCTTGGCTCAGCAGCAGATTTCCCTTGAAGCACTTG
CAAAAGGTTGAGGTATAGGA

Downstream 100 bases:

>100_bases
CGTGGACGGGCCGCGCCGCATCACGGTCAAGCACGGCGCGGTCGAGGATGAAGTGCGTTGGCAGCGGGCCGCCTCGCGCA
CCGCCGAAGGCATCGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MYTGWIKPFPKGVRFSEDDRARELIRGFDNSSMAAQRLSLISINSTYIDWIDRRFLYRGMLNMSIVFIGVIGFLIFSLVC
LFKMFEAGRTVLAFATVAAFSAFMGFLLYSLLLKNEFFRYVYYPIRFNRKTRKIYVFREKRDGGLLIVPWDEVFFHIGRG
TDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISAVGF
TNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQGI
KTPPDAPSDLASQFKDWGKK

Sequences:

>Translated_340_residues
MYTGWIKPFPKGVRFSEDDRARELIRGFDNSSMAAQRLSLISINSTYIDWIDRRFLYRGMLNMSIVFIGVIGFLIFSLVC
LFKMFEAGRTVLAFATVAAFSAFMGFLLYSLLLKNEFFRYVYYPIRFNRKTRKIYVFREKRDGGLLIVPWDEVFFHIGRG
TDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISAVGF
TNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQGI
KTPPDAPSDLASQFKDWGKK
>Mature_340_residues
MYTGWIKPFPKGVRFSEDDRARELIRGFDNSSMAAQRLSLISINSTYIDWIDRRFLYRGMLNMSIVFIGVIGFLIFSLVC
LFKMFEAGRTVLAFATVAAFSAFMGFLLYSLLLKNEFFRYVYYPIRFNRKTRKIYVFREKRDGGLLIVPWDEVFFHIGRG
TDMKFLRDIRGEILDGDIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISAVGF
TNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAIRKAQGI
KTPPDAPSDLASQFKDWGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39252; Mature: 39252

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTGWIKPFPKGVRFSEDDRARELIRGFDNSSMAAQRLSLISINSTYIDWIDRRFLYRGM
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHH
LNMSIVFIGVIGFLIFSLVCLFKMFEAGRTVLAFATVAAFSAFMGFLLYSLLLKNEFFRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYYPIRFNRKTRKIYVFREKRDGGLLIVPWDEVFFHIGRGTDMKFLRDIRGEILDGDIVK
EEEEEEECCCEEEEEEEEECCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
DTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISAVGF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHEEEEECCCHHHHHHHHHCC
TNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCHHHH
EFVTTVPGLMSYAIRKAQGIKTPPDAPSDLASQFKDWGKK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MYTGWIKPFPKGVRFSEDDRARELIRGFDNSSMAAQRLSLISINSTYIDWIDRRFLYRGM
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEEECHHHHHHHHHHHHHHHH
LNMSIVFIGVIGFLIFSLVCLFKMFEAGRTVLAFATVAAFSAFMGFLLYSLLLKNEFFRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYYPIRFNRKTRKIYVFREKRDGGLLIVPWDEVFFHIGRGTDMKFLRDIRGEILDGDIVK
EEEEEEECCCEEEEEEEEECCCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
DTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISAVGF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHEEEEECCCHHHHHHHHHCC
TNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCHHHH
EFVTTVPGLMSYAIRKAQGIKTPPDAPSDLASQFKDWGKK
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA