| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624937
Identifier: 84624937
GI number: 84624937
Start: 3726103
End: 3728046
Strand: Reverse
Name: 84624937
Synonym: XOO_3280
Alternate gene names: NA
Gene position: 3728046-3726103 (Counterclockwise)
Preceding gene: 84624938
Following gene: 84624936
Centisome position: 75.46
GC content: 64.09
Gene sequence:
>1944_bases ATGCGATCCGCAAGGCGCAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGC AAGAAGTAACGTGGACGGGCCGCGCCGCATCACGGTCAAGCACGGCGCGGTCGAGGATGAAGTGCGTTGGCAGCGGGCCG CCTCGCGCACCGCCGAAGGCATCGCGAACATCGACGACGCCCAGGATCTTCCCGATGCGACCTCCTACCTGTGGACCACC ATGACGCAAGGATCGGAGGTCGCCTTGCGTGAGCAGACCGCCCGGCGCGCGCAGCGCGAGCGCGCACGTGCCCAGGACGA TGCAAGGATCCGCGAGCAAGCCGACGCGAATGCCTCCGCACTGGGGCGGGAAGCGTGGAAGACATACACCAAGTACTTCG ATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGTATCCCCAGCAGCTGGAGCACTTCGGGCGCGAGGTGCTGGCCAGG CTGGACCCGCCCTACCTCGCCTGGCTCAAGAGTCCCTCGTTGACGACCTACCTGACCCACACCTTCGACGAGCACGATCT CGACAGCGGTGCCTCCTATACGGCCCTGGCGACCCAACTGCTGCACCATGCCAGCGGCCGTGGCGCGGTGTTCGACTACC TGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCGAGGCCTGGGTGGCGCGGGCGTTGGCGCTCAATCACGCGCCGCTG ATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGCAGCGAGCGCGAGCCATTCCTGCCGGAGTTCGTGGAGAAGTTCCA CGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAAGGGGGAATTGAACCGGCCGATGGTGAATGCGTTGGCGCGCTTCA TGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGGGGTCCGCGCTGGATCACGGCATGGCGTTTGCGGCCCTGCCGCTG CCGTCGAAATGGCAGTTGGGCTTGTTGGGCGCGGTGGCGCGCGCGGAGACGCCGACCCTGCGGATGGTGGATCTGCGCGG CACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGCCAATCTGGTGTCCTCGCTGGGCGCCGGGCCGGCGGGCGCGGCGC GCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGGACACGGCCGAGCGCTATCCGTTCCGGGCGGTGATGCTGGTAGAC GAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGTGCGGCGCTGAAGGCCGGCATGGCCGAGGCGCTGAGCGCCCACCA ATTCGATGACGTGATGCAGGAATCGGTGGGCAAGCTGGCCAGCCTGGAAGTGAAGGTGGCGGTGGTGCAGGCGATCCTGT CGTCGATCACGCTGTATCTGTCGTACGGCAAACTGATGAAGGCCGAGCAGGACAAGGTGTGGAGCGAACGGGTCAACGTG GCCGGCGGGGTGATCGGATTGGTGGGTGGATTGACCGAAGCGACCGGCACTGTGCTGGAGAAGACCCCCTGGGGCCAGAC CCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGTGATCGAGAGCCGTGCGGGGTGGTTTACCGGCACCGGCAAGCTGA TGGGCGTGGTGGGTGGGGTGATTGGGGGGGTGTTGGCGATTAAAGATGGCGTTGCAACCTACAAAAAACATCCTGTGATT GGCTTGCTTCTCGGAGGTCTGGGGTTACTTTCAGTGGTTGCGGCAATTATGTTGTTATTTACCAGTCTGGCGGGAGTGGG GCTAGTAATCGGGATTTTAATAGCGATTATTATGTCGGTCGTTTATTGGATAAAGCCTAATGCAATTCAAGATTGGTTGG TTGATACCCAATTTGGCCTGGCTGATCAAGGGGGAGGGTCTGGATCAAAATTCACTAGCTTGGCTCAGCAGCAATTAGCA CTGGAGGCTCTCAGTAGAGGCTGA
Upstream 100 bases:
>100_bases GTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCTGGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCAC CGTGCCGGGCTTGATGTCCT
Downstream 100 bases:
>100_bases TAAAATGTATACTGGTTGGATAAGAGGTTTCAAAAAAAATAGATTTTTGAGCTCTGATGAGCGGGCTTCCGTTCTTTCTA GGGAAGGTGCTGGGGTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSEVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVNALARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAHQFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEQDKVWSERVNV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGVATYKKHPVI GLLLGGLGLLSVVAAIMLLFTSLAGVGLVIGILIAIIMSVVYWIKPNAIQDWLVDTQFGLADQGGGSGSKFTSLAQQQLA LEALSRG
Sequences:
>Translated_647_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSEVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVNALARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAHQFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEQDKVWSERVNV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGVATYKKHPVI GLLLGGLGLLSVVAAIMLLFTSLAGVGLVIGILIAIIMSVVYWIKPNAIQDWLVDTQFGLADQGGGSGSKFTSLAQQQLA LEALSRG >Mature_647_residues MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT MTQGSEVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVNALARFMYQLTGPLVRELGSALDHGMAFAALPL PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD EAKVAQLEGSGGAALKAGMAEALSAHQFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEQDKVWSERVNV AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAIKDGVATYKKHPVI GLLLGGLGLLSVVAAIMLLFTSLAGVGLVIGILIAIIMSVVYWIKPNAIQDWLVDTQFGLADQGGGSGSKFTSLAQQQLA LEALSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70171; Mature: 70171
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH IANIDDAQDLPDATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIREQADANASA CCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVNALARFMYQLTGP HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHEECCCCCHHHHHHHH EALSAHQFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEQDKVWSERVNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHH IGGVLAIKDGVATYKKHPVIGLLLGGLGLLSVVAAIMLLFTSLAGVGLVIGILIAIIMSV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYWIKPNAIQDWLVDTQFGLADQGGGSGSKFTSLAQQQLALEALSRG HHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH IANIDDAQDLPDATSYLWTTMTQGSEVALREQTARRAQRERARAQDDARIREQADANASA CCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVNALARFMYQLTGP HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHEECCCCCHHHHHHHH EALSAHQFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEQDKVWSERVNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCEECCCHHHHHHHHHH IGGVLAIKDGVATYKKHPVIGLLLGGLGLLSVVAAIMLLFTSLAGVGLVIGILIAIIMSV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYWIKPNAIQDWLVDTQFGLADQGGGSGSKFTSLAQQQLALEALSRG HHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA