| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624934
Identifier: 84624934
GI number: 84624934
Start: 3722190
End: 3723221
Strand: Reverse
Name: 84624934
Synonym: XOO_3277
Alternate gene names: NA
Gene position: 3723221-3722190 (Counterclockwise)
Preceding gene: 84624935
Following gene: 84624933
Centisome position: 75.37
GC content: 53.1
Gene sequence:
>1032_bases ATGTTTACTGGATGGTCAAGGGCGTTTAAGATTAATAGGCCGTTGGATGAGGGGGAGAAATCTTCGTCTCTTCTGCGAGA TCTGAAGGAAAATGTAATCCCTGCGCAACGGCTTGGGTTGATAAAGATAAATTCGTCATACATCGACTGGATTGACAGGA GGTTTCTCTATCGCGGAATGTTGAATACCTCTTTTGTATTAATTGGGGTGGTTGGATTTATTGGAATTGCATTATTCCTT GGTTTTCAGTCTTTTTTTGGGGGTTTTACAGAGATTGCCAAATGGTGTTTGAGGTTTCTGGTTTTTTTTGCGCTCCTGTG TGGGACGGTTTTATACTGGGTACTGCCTAGATATGAATTTTTTAAATTCATCTACTACCCAATCCGCTTCAACCGCAAAA CCCGTAAAATCTACGTCTTCCGCGAAAAGCGCGACGGCGGCTTGCTGATCGTTCCCTGGGACAAGGTCTTCTTCCATATC GGTCGTGGCACCGACATGAAGTTTCTCCGCGACATCCGTGGCGAGATTCTCGACGGCGAGATCGTCAAGGACACCTTCGC CCTCGGTCATTGCGCCGAGCGCGACGAACCGGTCAAGGAGATGTGGGAGTTCATCCGCCGCTACATGGAAGAAGGCCCGG AGGCGGTCGCCGAGCATCCATTGGACAAGTATGTCGAGCTGTCGGTCGCGCCGACCTGGAAGAACTGCCTGATTTCCGCC GTCGGCTTCACCAATGCCACCACGCCGTTCAAGCGCGTGCTGCTCTTCCCCTTCATCGGCACCTTCACCGTCGTGCGCTG GCTGGTGTTCAAGAGCTGCAAGCAACCGGTCTTCCCGCCGGAAGTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGC ACATCTGGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCACCGTGCCGGGCTTGATGTCCTATGCGATGCGCAAGGCG CAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGCAAGAAGTAA
Upstream 100 bases:
>100_bases TTTACGGAAAAACAGATGTTGGAGCTGAGAAAAACGGTTTCAAGGGTTTGGCGCAGCAGCAGATTGCATTGGAAAGTATT GCTAAATCTTAAGGAATTCC
Downstream 100 bases:
>100_bases CGTGGACGGGCCGCGCTGCATCACGGTCAAGGATGCGGCACGCGCCACCAAGGTATGGCTGGGGTTCTCGGATGTGACGT GGAAAGCGGCCGTGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MFTGWSRAFKINRPLDEGEKSSSLLRDLKENVIPAQRLGLIKINSSYIDWIDRRFLYRGMLNTSFVLIGVVGFIGIALFL GFQSFFGGFTEIAKWCLRFLVFFALLCGTVLYWVLPRYEFFKFIYYPIRFNRKTRKIYVFREKRDGGLLIVPWDKVFFHI GRGTDMKFLRDIRGEILDGEIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISA VGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAMRKA QGIKTPPDAPSDLASQFKDWGKK
Sequences:
>Translated_343_residues MFTGWSRAFKINRPLDEGEKSSSLLRDLKENVIPAQRLGLIKINSSYIDWIDRRFLYRGMLNTSFVLIGVVGFIGIALFL GFQSFFGGFTEIAKWCLRFLVFFALLCGTVLYWVLPRYEFFKFIYYPIRFNRKTRKIYVFREKRDGGLLIVPWDKVFFHI GRGTDMKFLRDIRGEILDGEIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISA VGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAMRKA QGIKTPPDAPSDLASQFKDWGKK >Mature_343_residues MFTGWSRAFKINRPLDEGEKSSSLLRDLKENVIPAQRLGLIKINSSYIDWIDRRFLYRGMLNTSFVLIGVVGFIGIALFL GFQSFFGGFTEIAKWCLRFLVFFALLCGTVLYWVLPRYEFFKFIYYPIRFNRKTRKIYVFREKRDGGLLIVPWDKVFFHI GRGTDMKFLRDIRGEILDGEIVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISA VGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPNSIGEFVTTVPGLMSYAMRKA QGIKTPPDAPSDLASQFKDWGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39723; Mature: 39723
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTGWSRAFKINRPLDEGEKSSSLLRDLKENVIPAQRLGLIKINSSYIDWIDRRFLYRGM CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHH LNTSFVLIGVVGFIGIALFLGFQSFFGGFTEIAKWCLRFLVFFALLCGTVLYWVLPRYEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKFIYYPIRFNRKTRKIYVFREKRDGGLLIVPWDKVFFHIGRGTDMKFLRDIRGEILDGE HHHHHHHHEECCCEEEEEEEEECCCCCEEEEEHHHHHEECCCCCCHHHHHHHHHHHCCCH IVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHEEEEECCCHHHHHHHH VGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCH SIGEFVTTVPGLMSYAMRKAQGIKTPPDAPSDLASQFKDWGKK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFTGWSRAFKINRPLDEGEKSSSLLRDLKENVIPAQRLGLIKINSSYIDWIDRRFLYRGM CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHHHHH LNTSFVLIGVVGFIGIALFLGFQSFFGGFTEIAKWCLRFLVFFALLCGTVLYWVLPRYEF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKFIYYPIRFNRKTRKIYVFREKRDGGLLIVPWDKVFFHIGRGTDMKFLRDIRGEILDGE HHHHHHHHEECCCEEEEEEEEECCCCCEEEEEHHHHHEECCCCCCHHHHHHHHHHHCCCH IVKDTFALGHCAERDEPVKEMWEFIRRYMEEGPEAVAEHPLDKYVELSVAPTWKNCLISA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHEEEEECCCHHHHHHHH VGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPPEVEAECQVEPNDPHIWPIPN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCH SIGEFVTTVPGLMSYAMRKAQGIKTPPDAPSDLASQFKDWGKK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA