Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624935

Identifier: 84624935

GI number: 84624935

Start: 3723230

End: 3725167

Strand: Reverse

Name: 84624935

Synonym: XOO_3278

Alternate gene names: NA

Gene position: 3725167-3723230 (Counterclockwise)

Preceding gene: 84624936

Following gene: 84624934

Centisome position: 75.4

GC content: 63.26

Gene sequence:

>1938_bases
ATGCGATCCGCAAGGCGCAGGGCATCAAGACACCGCCCGATGCACCCAGCGATCTTGCATCGCAGTTCAAGGATTGGGGC
AAGAAGTAACGTGGACGGGCCGCGCCGCATCACGGTCAAGCACGGCGCGGTCGAGGATGAAGTGCGTTGGCAGCGGGCCG
CCTCGCGCACCGCCGAAGGCATCGCGAACATCGACGACGCCCAGGATCTTCCCGATGCGACCTCCTACCTGTGGACCACT
ATGACGCAAGGATCGGATGTCGCCTTGCGTGAGCAGACCGCCCGGCGCGCGCAGCGCGAGCGCGCACGTGCCCAGGACGA
TGCAAGGATCCGCGAGCAAGCCGACGCGAATGCCTCCGCACTGGGGCGGGAAGCGTGGAAGACATACACCAAGTACTTCG
ATGAGCCGGCGCAGCGCCGCGTGGTCGATCAGGAGTATCCCCAGCAGCTGGAGCACTTCGGGCGCGAGGTGCTGGCCAGG
CTGGACCCGCCCTACCTCGCCTGGCTCAAGAGTCCCTCGTTGACGACCTACCTGACCCACACCTTCGACGAGCACGATCT
CGACAGCGGTGCCTCCTATACGGCCCTGGCGACCCAACTGCTGCACCATGCCAGCGGCCGTGGCGCGGTGTTCGACTACC
TGTGCCAGAGCATCCAGCAGGCGCCGACCGCGCCCGAGGCCTGGGTGGCGCGGGCGTTGGCGCTCAATCACGCGCCGCTG
ATCCAGGCGAGCTGGGAGGAGGCGGCCAGGAAGGGCAGCGAGCGCGAGCCATTCCTGCCGGAGTTCGTGGAGAAGTTCCA
CGACAAGTTCAAGGATGTGCTGGTGGCCGGTGGCAAGGGGGAATTGAACCGGCCGATGGTGGATGCGGTGGCGCGCTTCA
TGTACCAGCTGACCGGCCCGCTGGTGCGCGAGCTGGGGTCCGCGCTGGATCACGGCATGGCGTTTGCGGCCCTGCCGCTG
CCGTCGAAATGGCAGCTGGGCTTGTTGGGCGCGGTGGCGCGCGCGGAGACGCCGACCCTGCGGATGGTGGATCTGCGCGG
CACGCGCAGTTTCAGCGAAGCGACCAAGCTGCTGGCCAATCTGGTGTCCTCGCTGGGCGCCGGGCCGGCGGGCGCGGCGC
GCGGCGCGGTGCGGCCGACGCTGCGGCCGGTGATGGACACGGCCGAGCGCTATCCGTTCCGGGCGGTGATGCTGGTAGAC
GAGGCCAAGGTCGCGCAGCTGGAAGGCAGCGGCGGTGCGGCGCTGAAGGCCGGCATGGCCGAGGCGCTGAGCGCGCGGGA
ATTCGATGACGTGATGCAGGAGTCGGTGGGCAAGCTGGCCAGCCTGGAAGTGAAGGTGGCGGTGGTGCAGGCGATCCTGT
CGTCGATCACGCTGTATCTGTCGTACGGCAAACTGATGAAGGCCGAGGAGGACAAGGTGTGGAGCGAACGGATCAACGTG
GCCGGCGGGGTGATCGGATTGGTGGGTGGATTGACCGAAGCCACCGGCACTGTGCTGGAGAAGACCCCCTGGGGCCAGAC
CCGCCTGAGCTGGCAGTTCCGGTTCCAGGCGGTGGTGATCGAGAGCCGTGCGGGTTGGTTTACCGGCACCGGCAAGCTGA
TGGGCGTGGTGGGCGGTGTGATTGGGGGGGTGTTGGCGATGATTGATGGTTTTAAGACGTTCAAAAAACATCCTGTAATT
GGAACTTTGATTATGGCGCTAGGATTTATTTCTATCGCCGCAGCATTCTTGCTCCTCACCTCTGCTGCGGGAATTGGAAT
AATAATTGGTTTGGTTGTTGCGGCAATTATGGCTGTAGTATATTTAATAAAGCCAAACGCGCTGCAGGATTTTTTAATCG
ATACTCTTTACGGAAAAACAGATGTTGGAGCTGAGAAAAACGGTTTCAAGGGTTTGGCGCAGCAGCAGATTGCATTGGAA
AGTATTGCTAAATCTTAA

Upstream 100 bases:

>100_bases
GTGGAAGCCGAGTGCCAGGTCGAGCCGAACGACCCGCACATCTGGCCGATCCCCAACTCGATAGGCGAGTTCGTCACCAC
CGTGCCGGGCTTGATGTCCT

Downstream 100 bases:

>100_bases
GGAATTCCATGTTTACTGGATGGTCAAGGGCGTTTAAGATTAATAGGCCGTTGGATGAGGGGGAGAAATCTTCGTCTCTT
CTGCGAGATCTGAAGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT
MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR
LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL
IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL
PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD
EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV
AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI
GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE
SIAKS

Sequences:

>Translated_645_residues
MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT
MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR
LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL
IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL
PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD
EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV
AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI
GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE
SIAKS
>Mature_645_residues
MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEGIANIDDAQDLPDATSYLWTT
MTQGSDVALREQTARRAQRERARAQDDARIREQADANASALGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLAR
LDPPYLAWLKSPSLTTYLTHTFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL
IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGPLVRELGSALDHGMAFAALPL
PSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLANLVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVD
EAKVAQLEGSGGAALKAGMAEALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV
AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGVIGGVLAMIDGFKTFKKHPVI
GTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVVYLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALE
SIAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70080; Mature: 70080

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG
CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
IANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIREQADANASA
CCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH
LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH
TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGP
HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH
LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN
HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHEECCCCCHHHHHHHH
EALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV
HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH
IGGVLAMIDGFKTFKKHPVIGTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALESIAKS
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSARRRASRHRPMHPAILHRSSRIGARSNVDGPRRITVKHGAVEDEVRWQRAASRTAEG
CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
IANIDDAQDLPDATSYLWTTMTQGSDVALREQTARRAQRERARAQDDARIREQADANASA
CCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHH
LGREAWKTYTKYFDEPAQRRVVDQEYPQQLEHFGREVLARLDPPYLAWLKSPSLTTYLTH
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHH
TFDEHDLDSGASYTALATQLLHHASGRGAVFDYLCQSIQQAPTAPEAWVARALALNHAPL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
IQASWEEAARKGSEREPFLPEFVEKFHDKFKDVLVAGGKGELNRPMVDAVARFMYQLTGP
HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH
LVRELGSALDHGMAFAALPLPSKWQLGLLGAVARAETPTLRMVDLRGTRSFSEATKLLAN
HHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
LVSSLGAGPAGAARGAVRPTLRPVMDTAERYPFRAVMLVDEAKVAQLEGSGGAALKAGMA
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHEECCCCCHHHHHHHH
EALSAREFDDVMQESVGKLASLEVKVAVVQAILSSITLYLSYGKLMKAEEDKVWSERINV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGVIGLVGGLTEATGTVLEKTPWGQTRLSWQFRFQAVVIESRAGWFTGTGKLMGVVGGV
HHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH
IGGVLAMIDGFKTFKKHPVIGTLIMALGFISIAAAFLLLTSAAGIGIIIGLVVAAIMAVV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YLIKPNALQDFLIDTLYGKTDVGAEKNGFKGLAQQQIALESIAKS
HHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA