| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624826
Identifier: 84624826
GI number: 84624826
Start: 3589513
End: 3589863
Strand: Reverse
Name: 84624826
Synonym: XOO_3169
Alternate gene names: NA
Gene position: 3589863-3589513 (Counterclockwise)
Preceding gene: 84624828
Following gene: 84624825
Centisome position: 72.67
GC content: 63.53
Gene sequence:
>351_bases ATGCGCCGTGCAGAGTCTGCCCGGAAGGCGTTGATCGCTTACAGTGCCGGGCTCGCCAAGCAGACGAGTATCGACGACGT CACGCCGGACAATGCGTGCAAGGTCTTGGATATGTTCGCGCTCGATTCCGAGCAAATCCGCGAACTCGGGCTGATTGGGG TGGAGGAGTTGGGCGAGGCGGTCTATCACGCTTGGTCCATCAATGCCGGCGAGCTGGAGCGGGTGGTGCAATGGTTCCGG GCACCCCGGGTGGAATTTGTCGGCAAGCATTGCAGCGAACTGATCCGCGCCGGGCGGATCGGCCCGGTCCTGACCATGGC CCGCGAGCAAGCCCTGCTGTGCCATCGCTGA
Upstream 100 bases:
>100_bases GCGTAGCGTCAGGGAGATCCCGATTGAGCCGGTTCTAGCGCCGCCGCATAGTGCAGGCATGACCACGCATTCACAACTTG TCGGCGCACTGATCAAGGGG
Downstream 100 bases:
>100_bases GCGCCAGCGGACCCGCACGGGCCCAGGCGCTTTACGCTGAGCGGCCTAGCGGCAATACTCGCTAACCCGCACCTACCTTA TGTTTTGCCAATGCGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRRAESARKALIAYSAGLAKQTSIDDVTPDNACKVLDMFALDSEQIRELGLIGVEELGEAVYHAWSINAGELERVVQWFR APRVEFVGKHCSELIRAGRIGPVLTMAREQALLCHR
Sequences:
>Translated_116_residues MRRAESARKALIAYSAGLAKQTSIDDVTPDNACKVLDMFALDSEQIRELGLIGVEELGEAVYHAWSINAGELERVVQWFR APRVEFVGKHCSELIRAGRIGPVLTMAREQALLCHR >Mature_116_residues MRRAESARKALIAYSAGLAKQTSIDDVTPDNACKVLDMFALDSEQIRELGLIGVEELGEAVYHAWSINAGELERVVQWFR APRVEFVGKHCSELIRAGRIGPVLTMAREQALLCHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12922; Mature: 12922
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAESARKALIAYSAGLAKQTSIDDVTPDNACKVLDMFALDSEQIRELGLIGVEELGEA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH VYHAWSINAGELERVVQWFRAPRVEFVGKHCSELIRAGRIGPVLTMAREQALLCHR HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRRAESARKALIAYSAGLAKQTSIDDVTPDNACKVLDMFALDSEQIRELGLIGVEELGEA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH VYHAWSINAGELERVVQWFRAPRVEFVGKHCSELIRAGRIGPVLTMAREQALLCHR HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA