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The map label for this gene is 84624825

Identifier: 84624825

GI number: 84624825

Start: 3589030

End: 3589422

Strand: Reverse

Name: 84624825

Synonym: XOO_3168

Alternate gene names: NA

Gene position: 3589422-3589030 (Counterclockwise)

Preceding gene: 84624826

Following gene: 84624822

Centisome position: 72.66

GC content: 60.31

Gene sequence:

>393_bases
ATGCGCCAGGATCCGCCCGCTTCACCCTCCGCCGCCGCCCGGGCCCAGCTGCTGGAAGAGTTGCGCAAACTCGAGCAGGA
AGAAGCGCAGCTGAAATACGCCCAGACGCTGGAAGCCTTCGACCAAGTGATCGAGGTGCTTACCCAGTTCGGCAATCGTT
TCAATGCCAAGCAGAAATCCCAGATTGCCTCGCTGGCGATGACCGGCAAGACCAAGGGGCCGTTGTCCTCCACTGGCGAC
GTCGTTGCCAAATACTGGATTCCGCATTCCGGCGAGACCTGGTCCGGCCGTGGCCGTACGCCGAAGGCGTTCAAGGCTTG
GGAAGGCACCAGCTCTTACAAGGAATGGAAAGCCAATCATCCGGACAAGCGCTTTCCGCTGTATCCGGGTTGA

Upstream 100 bases:

>100_bases
CCATCGCTGAGCGCCAGCGGACCCGCACGGGCCCAGGCGCTTTACGCTGAGCGGCCTAGCGGCAATACTCGCTAACCCGC
ACCTACCTTATGTTTTGCCA

Downstream 100 bases:

>100_bases
GTGGTTCGATCCGCTTTTTTCTAAGAACCTGTTCACGATCTCCTGAGCAGCAGTGCTAGGAACGCCAGATGGATGAACTG
CAAGCTGGTATTGAGCCTTC

Product: virulence regulator

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein; Histone-Like Nucleoid-Structuring Protein H-Ns

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRQDPPASPSAAARAQLLEELRKLEQEEAQLKYAQTLEAFDQVIEVLTQFGNRFNAKQKSQIASLAMTGKTKGPLSSTGD
VVAKYWIPHSGETWSGRGRTPKAFKAWEGTSSYKEWKANHPDKRFPLYPG

Sequences:

>Translated_130_residues
MRQDPPASPSAAARAQLLEELRKLEQEEAQLKYAQTLEAFDQVIEVLTQFGNRFNAKQKSQIASLAMTGKTKGPLSSTGD
VVAKYWIPHSGETWSGRGRTPKAFKAWEGTSSYKEWKANHPDKRFPLYPG
>Mature_130_residues
MRQDPPASPSAAARAQLLEELRKLEQEEAQLKYAQTLEAFDQVIEVLTQFGNRFNAKQKSQIASLAMTGKTKGPLSSTGD
VVAKYWIPHSGETWSGRGRTPKAFKAWEGTSSYKEWKANHPDKRFPLYPG

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14568; Mature: 14568

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQDPPASPSAAARAQLLEELRKLEQEEAQLKYAQTLEAFDQVIEVLTQFGNRFNAKQKS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QIASLAMTGKTKGPLSSTGDVVAKYWIPHSGETWSGRGRTPKAFKAWEGTSSYKEWKANH
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCC
PDKRFPLYPG
CCCCCCCCCC
>Mature Secondary Structure
MRQDPPASPSAAARAQLLEELRKLEQEEAQLKYAQTLEAFDQVIEVLTQFGNRFNAKQKS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QIASLAMTGKTKGPLSSTGDVVAKYWIPHSGETWSGRGRTPKAFKAWEGTSSYKEWKANH
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCC
PDKRFPLYPG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA