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The map label for this gene is rng [H]

Identifier: 84624787

GI number: 84624787

Start: 3549061

End: 3550560

Strand: Reverse

Name: rng [H]

Synonym: XOO_3130

Alternate gene names: 84624787

Gene position: 3550560-3549061 (Counterclockwise)

Preceding gene: 84624788

Following gene: 84624786

Centisome position: 71.87

GC content: 64.47

Gene sequence:

>1500_bases
ATGTCGGAAGAGATCTTGGTCAACGTCACTCCACGCGAGACCCGTGTGGCGGTGATCGAGAACGGCATGCTGCAGGAGCT
GCATATCGAGCGCGGTTGGCGCCGAGGCGTGGTGGGCAATATCTACAAAGGCAAAGTGCAGCGGGTGATGCCCGGCATGC
AGGCTGCCTTTGTCGAAGTAGGGCTGGAGCGTGCCGCCTTCCTGCACGCCAACGATGTGATCCGTCTGGCGCCGGCGCCG
GCCAGCGTGGTCGATACCGAAGAAACGCCGATCCCGCCGCCACCGCCGGCCTCGGTGCCGATCGTGGAGCTGCTGCGCGA
TGGCCAGGACATCGTGGTGCAGGTGGTCAAGGACCCGATCGGCACCAAGGGGGCGCGGTTGACCACCCAGATCAGCATTC
CGTCGCGCTATCTGGTGCTGCTGCCGCAGTCCAAGGTCGTTGGGGTGTCGGCGCGCATCGAAGACGAAGCCGAGCGGCTG
CGCCTGAAGACCATCGTCAGCGAGGTCTCGGCCCAGCATGGCGGCTTCGGCTACATCATCCGCACCAATGCCGAAGGCCA
GCCGGCCGAGGCGCTGGCCGAGGACATCGCGTATCTCTCGCGGGTCTGGAACGTGGTCGAGCGCCGCGGCCGCGAGGCGC
CGCCGTGCAGCATCATCTACGAAGACCTGAGCCTGCCGCTGCGTGCGGTGCGCGACCTGATCCGCCGCGACGTGGAAAAG
GTCAAAGTCGATTCCAACGAGACCTTCGTGCAATTGCAGGCCTTCGTGGCCAAGTACATGCCGGTGCTGGCCGAGCGGCT
GGAGCTGTACACCGGCGACCGGCCGATCTTCGACCTGTACGGCGTGGAAGACGAGATCGGCCGTGCGTTGAACAAGCAGG
TGCCGCTCAAGTCCGGGGGCTACCTGGTGATCGACCAGACCGAAGCGATGACCACCATCGACGTCAACACCGGCTCGTTC
GTCGGTCAGCGCAACCTCGAAGAAACCGTGTTCCGCACCAATCTGGAAGCCGCACAGGCGGTGGCGCGGCAACTGCGCCT
GCGCAACCTGGGCGGCATCATCATCATCGACTTCATCGACATGGACGACTCCGAGCATCGTCGTCAGGTGCTGCGCACGC
TGGAGAAGGCGCTGGCACGCGATCACGCCAAGACCACCGTGTACGAGTTCTCGCCGTTGGGCTTGGTGGAGATGACCCGC
AAGCGCACCGTCGAAAGCCTCGAGCGCCAGCTCTCGGAAACCTGCGGCCAATGCGGTGGGCGCGGCACCATCAAGACCGC
CGAAACGGTGACCTACGAGATCTTTCGCGAGATCACCCGCGCGGTGCGCCAGTTCGATGCCGCGCGCCTGCTGGTGATCG
CGTCGTCGAAAGTGGTCGCGCGCATCACCGACGAAGAATCGGCAGCCGTGGCCGAGCTGGAAGAGTTTCTCGGCAAGAGC
ATCCTCTTCCAGTCCGACGACCAGTATCTGCAGGAGCAGTTCGATGTGGTGCTGCTGTGA

Upstream 100 bases:

>100_bases
CCGAGCGCTTCATTCGCCATCTGTCCGGAAGCTATTCCGGCGTGATGGGATTGCCGCTTTATCACACCTCGCAGTTGCTC
ACAGCCTTCGGAGCGCATTG

Downstream 100 bases:

>100_bases
GGTCGGGATTGGAGAATCGGGATTCGGGATTTGTAAAAGCCGGCCCCGTCATGATGTGCGGCCAGCAGGCGCGTTGACGT
TACCGTGCCCGGACACGCTG

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVIRLAPAP
ASVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
ILFQSDDQYLQEQFDVVLL

Sequences:

>Translated_499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVIRLAPAP
ASVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
ILFQSDDQYLQEQFDVVLL
>Mature_498_residues
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVIRLAPAPA
SVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLR
LKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEKV
KVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGGYLVIDQTEAMTTIDVNTGSFV
GQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRK
RTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKSI
LFQSDDQYLQEQFDVVLL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=499, Percent_Identity=56.312625250501, Blast_Score=528, Evalue=1e-151,
Organism=Escherichia coli, GI1787325, Length=475, Percent_Identity=35.7894736842105, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55703; Mature: 55571

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVIRLAPAPASVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDPI
HHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
ILFQSDDQYLQEQFDVVLL
EEECCCHHHHHHHCCEECC
>Mature Secondary Structure 
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVIRLAPAPASVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDPI
HHHHHHEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
ILFQSDDQYLQEQFDVVLL
EEECCCHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]