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The map label for this gene is yhdE [C]

Identifier: 84624788

GI number: 84624788

Start: 3550560

End: 3551132

Strand: Reverse

Name: yhdE [C]

Synonym: XOO_3131

Alternate gene names: 84624788

Gene position: 3551132-3550560 (Counterclockwise)

Preceding gene: 84624792

Following gene: 84624787

Centisome position: 71.88

GC content: 66.49

Gene sequence:

>573_bases
ATGCTCTATCTCGCTTCCCGTTCGCCGCGCCGACAAGAACTCCTGCAACGCCTGGATGTGCCATTCCAGACGGTGCAACT
GGATGTGCCCGAGCTGCGCGCAGCCGATGAATCGCCCGACCACTACGTGCAGCGCGTCGCGTTGGACAAGGCGCACGCCG
GCCTGGCGCTGGTACAGGCCGCCGACCCCGATGCCATCGTGCTGGGCTCCGATACCGAAGTGGTGCTGGGCGAGCGGGTG
TTCGGCAAGCCGGTCGATGTGGACGATGCCATCGCGATGCTGCGCGCGTTGTCCGGGCGCACCCACCAGGTGCTCACGGC
AGTGGTTCTGGTCTGCGCACAGCGCGCGCCGGCGCAGGCACTGGTGGTGTCGGAGGTCACCTTCGACAGGCTCGATGACG
CGCAGATCGCCGCCTACGCCGCCTGTGGCGAGCCGATGGGCAAGGCCGGCGCGTACGCGATCCAGGGCCGTGCCGAGCGC
TTCATTCGCCATCTGTCCGGAAGCTATTCCGGCGTGATGGGATTGCCGCTTTATCACACCTCGCAGTTGCTCACAGCCTT
CGGAGCGCATTGA

Upstream 100 bases:

>100_bases
CGATGAATATGTTGTGAGTCGAACGCAACAAGGCGATCGGCAACGGCGCATGCGTTCATCAAGCAAGCGGGCGAGTGCGG
GCAACAGGTATGCTGGACGG

Downstream 100 bases:

>100_bases
TGTCGGAAGAGATCTTGGTCAACGTCACTCCACGCGAGACCCGTGTGGCGGTGATCGAGAACGGCATGCTGCAGGAGCTG
CATATCGAGCGCGGTTGGCG

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLYLASRSPRRQELLQRLDVPFQTVQLDVPELRAADESPDHYVQRVALDKAHAGLALVQAADPDAIVLGSDTEVVLGERV
FGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQALVVSEVTFDRLDDAQIAAYAACGEPMGKAGAYAIQGRAER
FIRHLSGSYSGVMGLPLYHTSQLLTAFGAH

Sequences:

>Translated_190_residues
MLYLASRSPRRQELLQRLDVPFQTVQLDVPELRAADESPDHYVQRVALDKAHAGLALVQAADPDAIVLGSDTEVVLGERV
FGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQALVVSEVTFDRLDDAQIAAYAACGEPMGKAGAYAIQGRAER
FIRHLSGSYSGVMGLPLYHTSQLLTAFGAH
>Mature_190_residues
MLYLASRSPRRQELLQRLDVPFQTVQLDVPELRAADESPDHYVQRVALDKAHAGLALVQAADPDAIVLGSDTEVVLGERV
FGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQALVVSEVTFDRLDDAQIAAYAACGEPMGKAGAYAIQGRAER
FIRHLSGSYSGVMGLPLYHTSQLLTAFGAH

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=36.2694300518135, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI291045183, Length=192, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI291045181, Length=129, Percent_Identity=38.7596899224806, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI310133124, Length=129, Percent_Identity=38.7596899224806, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1789646, Length=188, Percent_Identity=51.063829787234, Blast_Score=159, Evalue=8e-41,
Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=31.413612565445, Blast_Score=81, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=28.125, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI78706856, Length=180, Percent_Identity=38.3333333333333, Blast_Score=100, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 20447; Mature: 20447

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLASRSPRRQELLQRLDVPFQTVQLDVPELRAADESPDHYVQRVALDKAHAGLALVQA
CEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEE
ADPDAIVLGSDTEVVLGERVFGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQA
CCCCEEEECCCCCEEECCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE
LVVSEVTFDRLDDAQIAAYAACGEPMGKAGAYAIQGRAERFIRHLSGSYSGVMGLPLYHT
EEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEECCCHHHH
SQLLTAFGAH
HHHHHHHCCC
>Mature Secondary Structure
MLYLASRSPRRQELLQRLDVPFQTVQLDVPELRAADESPDHYVQRVALDKAHAGLALVQA
CEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEE
ADPDAIVLGSDTEVVLGERVFGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQA
CCCCEEEECCCCCEEECCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCE
LVVSEVTFDRLDDAQIAAYAACGEPMGKAGAYAIQGRAERFIRHLSGSYSGVMGLPLYHT
EEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEECCCHHHH
SQLLTAFGAH
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]