Click here to switch to the map view.

The map label for this gene is 84624578

Identifier: 84624578

GI number: 84624578

Start: 3304001

End: 3304423

Strand: Direct

Name: 84624578

Synonym: XOO_2921

Alternate gene names: NA

Gene position: 3304001-3304423 (Clockwise)

Preceding gene: 84624577

Following gene: 84624579

Centisome position: 66.88

GC content: 69.98

Gene sequence:

>423_bases
ATGAACATGTATCGCGCCACGCTTGCCGGCCTCATCGTCGTCACCGGCCTCAGCGGCTGCGGCAAATCGCCGCAACAGGC
GGCCTCGCCCACCGTCGCCCCCACCGAGCTGGCTGCCGTGAAGACCCCACCGCCGGAATATGCACCGCAGCTGGCCTGCG
CCGGGATCGGCGGCACGACCGTGCTGCGGGTGGTGGTTGGCACCCAGGGCACGCCTACCGATGTCTTGGTGGCGCAGAGC
AGCGGCCAGCCCGTGCTCGACGAAGCCGCCCGGACGCGCGTGCGGGAATGGCAGTTCAAGGCCGCCACCCGCAATGGCCA
GGCCGTGCCGCAGACCATCCAGGTGCCGGTTTCGTTCAAGCCGCCGGTGCCGCGTCCGAACGAATGTTTCGCCATCGAAG
AACGCGCACGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
TCGTGGTGCGCTATTCCACCCATGACGTGGGCGGGCTGAGCGAAAACGACTTCATCTGCGCGGCCAAGACCGCACGGCTC
TACGATCAGGGAATCACTGC

Downstream 100 bases:

>100_bases
GGACGGCGCAGGTCGATGCCGTCTTCTATCTGTCTGCAGGGCACAGGCGCACAGACGCGTGACGACAATCGTGCCTATAT
CCGCCGGGTTGGTCTGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NB Dependent Receptor Protein; Nb Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNMYRATLAGLIVVTGLSGCGKSPQQAASPTVAPTELAAVKTPPPEYAPQLACAGIGGTTVLRVVVGTQGTPTDVLVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG

Sequences:

>Translated_140_residues
MNMYRATLAGLIVVTGLSGCGKSPQQAASPTVAPTELAAVKTPPPEYAPQLACAGIGGTTVLRVVVGTQGTPTDVLVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG
>Mature_140_residues
MNMYRATLAGLIVVTGLSGCGKSPQQAASPTVAPTELAAVKTPPPEYAPQLACAGIGGTTVLRVVVGTQGTPTDVLVAQS
SGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFKPPVPRPNECFAIEERARRGG

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14635; Mature: 14635

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMYRATLAGLIVVTGLSGCGKSPQQAASPTVAPTELAAVKTPPPEYAPQLACAGIGGTT
CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCCHHH
VLRVVVGTQGTPTDVLVAQSSGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFK
EEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
PPVPRPNECFAIEERARRGG
CCCCCCCCEEEEHHHHHCCC
>Mature Secondary Structure
MNMYRATLAGLIVVTGLSGCGKSPQQAASPTVAPTELAAVKTPPPEYAPQLACAGIGGTT
CCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCEEECCCCHHH
VLRVVVGTQGTPTDVLVAQSSGQPVLDEAARTRVREWQFKAATRNGQAVPQTIQVPVSFK
EEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
PPVPRPNECFAIEERARRGG
CCCCCCCCEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA