| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is phhB [H]
Identifier: 84624577
GI number: 84624577
Start: 3303648
End: 3304004
Strand: Direct
Name: phhB [H]
Synonym: XOO_2920
Alternate gene names: 84624577
Gene position: 3303648-3304004 (Clockwise)
Preceding gene: 84624568
Following gene: 84624578
Centisome position: 66.87
GC content: 64.71
Gene sequence:
>357_bases ATGACCGATCTGATTCCCCTGGAGCAGGCACATTGCCTCCCGCGCAAAGGCAGCGACCACAAGCTGGGCGAGGCGCGCCT GGCCGAATTGCTGCCGCAGGTCCCCGGCTGGGAGCTGGCCGAGGCCGGGATGGCGCTCACGCGCACGTTCCGCTTCGCCG ACTATTACCACACCCTGGCCTTTGTGAATGCGCTGGCCTGGATCGCCCACCGCGAAGACCATCACCCCGACCTAGGCGTG CATTACGACCGCGTCGTGGTGCGCTATTCCACCCATGACGTGGGCGGGCTGAGCGAAAACGACTTCATCTGCGCGGCCAA GACCGCACGGCTCTACGATCAGGGAATCACTGCATGA
Upstream 100 bases:
>100_bases TATCTGGATCATGCGGGTTATTCTACCGCTCAAAGCGCCCTCGCTCATGGAAAACCGTGATCCTAGTGGGTGCGCCGTCC GCCACCCCTGCGAGACCGTC
Downstream 100 bases:
>100_bases ACATGTATCGCGCCACGCTTGCCGGCCTCATCGTCGTCACCGGCCTCAGCGGCTGCGGCAAATCGCCGCAACAGGCGGCC TCGCCCACCGTCGCCCCCAC
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYHTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTARLYDQGITA
Sequences:
>Translated_118_residues MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYHTLAFVNALAWIAHREDHHPDLGV HYDRVVVRYSTHDVGGLSENDFICAAKTARLYDQGITA >Mature_117_residues TDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYHTLAFVNALAWIAHREDHHPDLGVH YDRVVVRYSTHDVGGLSENDFICAAKTARLYDQGITA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 13255; Mature: 13124
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYHTLA CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTARLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure TDLIPLEQAHCLPRKGSDHKLGEARLAELLPQVPGWELAEAGMALTRTFRFADYYHTLA CCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVNALAWIAHREDHHPDLGVHYDRVVVRYSTHDVGGLSENDFICAAKTARLYDQGITA HHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]