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The map label for this gene is 84624543

Identifier: 84624543

GI number: 84624543

Start: 3258047

End: 3259075

Strand: Direct

Name: 84624543

Synonym: XOO_2886

Alternate gene names: NA

Gene position: 3258047-3259075 (Clockwise)

Preceding gene: 84624542

Following gene: 84624566

Centisome position: 65.95

GC content: 66.28

Gene sequence:

>1029_bases
ATGCAGATCGACAACGCACCGTTGCTGCGACCGGTCGACGAACAGGTGCCATCCGGTCCGAACCTGGAATACACCCCGGA
GTTCCAGAGCCTGGAGGAACTTGCACGACCGCGTCAGGAGCGCGCCTTGGGCGCTGGCGTGCTTGTGCCCGACGCGCCGC
AATGGCGCCAGGTCGCCGAGAGCGCCGAACACTTGCTAGGGCGCTCCAAGGACTTGCGGCTGGGCATCTTGCTGAGCATC
GCCCGCTTGCACCAGGACGGTCTGGTGGGCTGGTCCAGCGGCGTCGGCCTGCTCCGACAACTGCTGGAGCAGTTCTGGGG
CGACGTCCATCCTCATCTGGATGCCGATGAAGACAACGACCCGACCGAACGCGTCAACGCCATCGCTGCGTTGGCCGACA
GCGAGCGCACGCTGACACAGCTGCGCAACGTGCGCCTATTCAAGGGACTGCATCCAGGACATTTCTCGCTGCGCGATCTG
CGCATCGTGCAAGGCACGCTCAAGCTCGCTGCGGAGGACGCGAGCGAGATACCAGATCCTGCCGCCATCGATGCCTGCCT
GCGCGACTGCCCGCTGGAGGCGTTGCTTGATCTGGACGCAGCCCTGGCCGCTGCGCAGGACGACATTGCCGCAATTGCCG
GCGTGTTCGCCGAGCGCACTCCGGGGCACGGTCCGGAGCTGGCACCGCTCACGCAGGATCTGGACGAGTTGCGTGCGTTC
CTGCGGCCCTATGTGTCCGAACGTTCCGGATCCCCGGCCGAGCCGACCGAACATGCAGCACCGGGCGCCGACACTGTCAG
GACATCGACGCCACGCGCGCACGCCGTGGAGCATCCGGACGAGGTTCGCCGCATGCTCGACCAGCTCTGCGATTACTACG
CGCGGCGCGAGCCCTCCAGCCCGGTGCCGTTACTGTTGCGGCGCGCACAACGCCTGGTCGGCCTGGATTTCACCGCACTG
ATACGCGATCTCGCGCCGCGCGCGATTGAAGAGCTGCAAGTGGTGTCGGGCCAGGAGCATTCCGACTAG

Upstream 100 bases:

>100_bases
ACCTGCTTGTTCCGGCAGCGCCGGCCGCAGCGGTGCCGGCCGCGGCGCGACGCACCGCCGGCCGTGCCGATCTCGTGCTA
TCCGTTTCGTGAGCCGCGCC

Downstream 100 bases:

>100_bases
AGCAGCCAACACAACGACTGCGTCGTCGCCGGTTGGGTGCGGCCGGTGCCCGGAATCGGCAGGTAGCACGCGTGCACTCC
GGTTCCTGTGCGCCGTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA-Like; Replication/Virulence Associated Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Core Protein; ImpA-Related N-Terminal Domain-Containing; Conserved Protein; Type VI Secretion System Protein ImpA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQIDNAPLLRPVDEQVPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPDAPQWRQVAESAEHLLGRSKDLRLGILLSI
ARLHQDGLVGWSSGVGLLRQLLEQFWGDVHPHLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKLAAEDASEIPDPAAIDACLRDCPLEALLDLDAALAAAQDDIAAIAGVFAERTPGHGPELAPLTQDLDELRAF
LRPYVSERSGSPAEPTEHAAPGADTVRTSTPRAHAVEHPDEVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFTAL
IRDLAPRAIEELQVVSGQEHSD

Sequences:

>Translated_342_residues
MQIDNAPLLRPVDEQVPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPDAPQWRQVAESAEHLLGRSKDLRLGILLSI
ARLHQDGLVGWSSGVGLLRQLLEQFWGDVHPHLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKLAAEDASEIPDPAAIDACLRDCPLEALLDLDAALAAAQDDIAAIAGVFAERTPGHGPELAPLTQDLDELRAF
LRPYVSERSGSPAEPTEHAAPGADTVRTSTPRAHAVEHPDEVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFTAL
IRDLAPRAIEELQVVSGQEHSD
>Mature_342_residues
MQIDNAPLLRPVDEQVPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPDAPQWRQVAESAEHLLGRSKDLRLGILLSI
ARLHQDGLVGWSSGVGLLRQLLEQFWGDVHPHLDADEDNDPTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDL
RIVQGTLKLAAEDASEIPDPAAIDACLRDCPLEALLDLDAALAAAQDDIAAIAGVFAERTPGHGPELAPLTQDLDELRAF
LRPYVSERSGSPAEPTEHAAPGADTVRTSTPRAHAVEHPDEVRRMLDQLCDYYARREPSSPVPLLLRRAQRLVGLDFTAL
IRDLAPRAIEELQVVSGQEHSD

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37554; Mature: 37554

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDNAPLLRPVDEQVPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPDAPQWRQVAE
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHH
SAEHLLGRSKDLRLGILLSIARLHQDGLVGWSSGVGLLRQLLEQFWGDVHPHLDADEDND
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDLRIVQGTLKLAAEDASEIPDP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
AAIDACLRDCPLEALLDLDAALAAAQDDIAAIAGVFAERTPGHGPELAPLTQDLDELRAF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LRPYVSERSGSPAEPTEHAAPGADTVRTSTPRAHAVEHPDEVRRMLDQLCDYYARREPSS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PVPLLLRRAQRLVGLDFTALIRDLAPRAIEELQVVSGQEHSD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQIDNAPLLRPVDEQVPSGPNLEYTPEFQSLEELARPRQERALGAGVLVPDAPQWRQVAE
CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHH
SAEHLLGRSKDLRLGILLSIARLHQDGLVGWSSGVGLLRQLLEQFWGDVHPHLDADEDND
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PTERVNAIAALADSERTLTQLRNVRLFKGLHPGHFSLRDLRIVQGTLKLAAEDASEIPDP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
AAIDACLRDCPLEALLDLDAALAAAQDDIAAIAGVFAERTPGHGPELAPLTQDLDELRAF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LRPYVSERSGSPAEPTEHAAPGADTVRTSTPRAHAVEHPDEVRRMLDQLCDYYARREPSS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PVPLLLRRAQRLVGLDFTALIRDLAPRAIEELQVVSGQEHSD
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA