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The map label for this gene is virG [H]

Identifier: 84624539

GI number: 84624539

Start: 3252720

End: 3253499

Strand: Direct

Name: virG [H]

Synonym: XOO_2882

Alternate gene names: 84624539

Gene position: 3252720-3253499 (Clockwise)

Preceding gene: 84624538

Following gene: 84624540

Centisome position: 65.84

GC content: 65.26

Gene sequence:

>780_bases
ATGAGCAAGCTGCATTCCCGTTCCTCCTCCTCCTCCGACGCATCCACGCCCCGCTCCGCCCCAGTCGCCAAGGTGCTGGT
GGTGGATGACGACCAGGCCATGGCCCACGTGGTCATGGGCCATATCCGTTCGCATGGCATGGAAGCCTTTGTCGCCACCA
ACAGCAGCGAACTGGCCGAGGCGCTGCGTCGGCGCGAGCCGGATATTCTGCTGCTGGACCTGATGCTCAAGCACGAAGAC
GGTCTGGACTTGTTGCGCGCCTTGCGCAAGGAATCCGATATCCCGGTGATCATCATGAGCGGCCATCGCCGCGACGAAAT
CGATCGCGTGGTGGGGCTGGAACTGGGCGCCGACGACTACCTGCCCAAGCCATTCGGATTGCATGAACTGACGGCGCGGA
TCCGCGCCGTGTTGCGCCGCCATATCACCTCCAAGATGGCGGCGGCACGCGGTGCGGGCGAAGGTCGCGTGCGCTTCGAT
GCGTGGGAATTCGATTTACAGGCCCGCACGGTGGGGCGCACAGGCGCACCTGCCATTGCGCTCACCAAGGGCGAATACGC
GCTGCTGCGCGCCTTTGTCGATGCACCGGGACGACCACTGAGCCGCGAGCACCTGATGCGAGCCACGCGTCTGCATGAGG
ACGTGTTCGACCGCAGTATCGACGTGCAGATCCTGCGCCTGCGCCGCAAGCTGGAGCAGGACCCGCGCGAGCCGACGCTG
ATCGTGACCCAGCGCGGCGCCGGTTACGTCTTCACGCCGTCGGTCGAGCACGCTCGATGA

Upstream 100 bases:

>100_bases
CGCATGGACGCAATTCCCCCACAGGATCGATGCGGTCATCCCCAACCAGTCGACACTCGGGATCTGTCCGCGAAGGCGGT
CATGCCGGAATTGAGAGTAG

Downstream 100 bases:

>100_bases
CGCAACCGCCGTCGCCGGCTCGGCCAGACCATCGCACACAGCGCTGGACGCCGGTGGCGATCATGAAGGTCGCGTTCGCT
TCCACAGCGTTCCTCGCGAT

Product: VirG-like two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATNSSELAEALRRREPDILLLDLMLKHED
GLDLLRALRKESDIPVIIMSGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHITSKMAAARGAGEGRVRFD
AWEFDLQARTVGRTGAPAIALTKGEYALLRAFVDAPGRPLSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
IVTQRGAGYVFTPSVEHAR

Sequences:

>Translated_259_residues
MSKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATNSSELAEALRRREPDILLLDLMLKHED
GLDLLRALRKESDIPVIIMSGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHITSKMAAARGAGEGRVRFD
AWEFDLQARTVGRTGAPAIALTKGEYALLRAFVDAPGRPLSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
IVTQRGAGYVFTPSVEHAR
>Mature_258_residues
SKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATNSSELAEALRRREPDILLLDLMLKHEDG
LDLLRALRKESDIPVIIMSGHRRDEIDRVVGLELGADDYLPKPFGLHELTARIRAVLRRHITSKMAAARGAGEGRVRFDA
WEFDLQARTVGRTGAPAIALTKGEYALLRAFVDAPGRPLSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTLI
VTQRGAGYVFTPSVEHAR

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=43.7229437229437, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=37.7682403433476, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=30.0429184549356, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788394, Length=240, Percent_Identity=35, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=37.5, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=38.6266094420601, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1786599, Length=235, Percent_Identity=35.3191489361702, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=32.5991189427313, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=34.4827586206897, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=32.618025751073, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790552, Length=243, Percent_Identity=32.0987654320988, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=28.2051282051282, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI87082012, Length=232, Percent_Identity=31.8965517241379, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=32.4675324675325, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790299, Length=112, Percent_Identity=37.5, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28942; Mature: 28810

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATNSSELAE
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHH
ALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMSGHRRDEIDRVVGLELGADDY
HHHHCCCCEEEEEHHHHCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCEECCCCC
LPKPFGLHELTARIRAVLRRHITSKMAAARGAGEGRVRFDAWEFDLQARTVGRTGAPAIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEE
LTKGEYALLRAFVDAPGRPLSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
EECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
IVTQRGAGYVFTPSVEHAR
EEEECCCCEEECCCCCCCC
>Mature Secondary Structure 
SKLHSRSSSSSDASTPRSAPVAKVLVVDDDQAMAHVVMGHIRSHGMEAFVATNSSELAE
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHH
ALRRREPDILLLDLMLKHEDGLDLLRALRKESDIPVIIMSGHRRDEIDRVVGLELGADDY
HHHHCCCCEEEEEHHHHCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCEECCCCC
LPKPFGLHELTARIRAVLRRHITSKMAAARGAGEGRVRFDAWEFDLQARTVGRTGAPAIA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEE
LTKGEYALLRAFVDAPGRPLSREHLMRATRLHEDVFDRSIDVQILRLRRKLEQDPREPTL
EECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE
IVTQRGAGYVFTPSVEHAR
EEEECCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3448462; 2194232; 7601840; 11743193; 11743194 [H]