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The map label for this gene is tnpA [H]

Identifier: 84624538

GI number: 84624538

Start: 3251760

End: 3252398

Strand: Direct

Name: tnpA [H]

Synonym: XOO_2881

Alternate gene names: 84624538

Gene position: 3251760-3252398 (Clockwise)

Preceding gene: 84624536

Following gene: 84624539

Centisome position: 65.82

GC content: 56.49

Gene sequence:

>639_bases
ATGCCCCTGGATCGCGCGCGCCGTCATGCCGCGGGCATACACGACTGGGCGCTGATCGAAACCCACTTCCAGGACATGCT
GCGAGTCGCCATCTCGATCAAACTCGGCAAGATCACCGCCTCTACAATCCTGCGCCGACTCGGCACTTACAGCCGTAAAA
ACAAGCTGTACTGGGCATTCCGTGAACTCGGCAAGGTAGTGCGCACACTGTTCCTGCTGCACTACATCGACGATGTCGAA
GTGCGCAAGACCATCAACGCGGCGACCAATAAAAGCGAGGAATTCAACGGTTTCGTCAAATGGGCCTTCTTCGCCGGGGA
AGGGATCATCGCCGAAAACGTCCAGCACGAGCAGCGCAAGATCGTGCGCTACAACCAACTCGTGGCAAATCTGATCATTC
TTCATAACGTCGAGCAGATGACCCGCGTTCTGGCCGAACTGCGGGACGAAGGCCGAACCATCGGCCCTGAAGCCCTGGCA
GAGCTGTCGCCATACCGGACATCGCACATCAATCGGTTAGGCGACTACACACTGGATCTCAATCGGGAGATCGACAGTGG
GTTAGGACACAATCGGCTGTTTTTTACACGAATCCCTGCCGACCCTCGTTATCCTTGGCGAAAGCAGGCTCGACAATAG

Upstream 100 bases:

>100_bases
TCCAGCGCCCGGCTCTGCCAGGCCTTCACCTCATCGACCACGGCATCGGTCACCGAGCAGATCAGGCTGGGCGCACCTCG
GCGCTGTACATCTGCTCCAG

Downstream 100 bases:

>100_bases
AATCCAGCCGAAGACATCGTTGTCGGATCTGACGCGCGTGTTCGGCACCGGCGCCCCGCTGGCGTCTTGCAGAGCGAGCG
GCTGGTCACAAGATCGAGCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPLDRARRHAAGIHDWALIETHFQDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAFRELGKVVRTLFLLHYIDDVE
VRKTINAATNKSEEFNGFVKWAFFAGEGIIAENVQHEQRKIVRYNQLVANLIILHNVEQMTRVLAELRDEGRTIGPEALA
ELSPYRTSHINRLGDYTLDLNREIDSGLGHNRLFFTRIPADPRYPWRKQARQ

Sequences:

>Translated_212_residues
MPLDRARRHAAGIHDWALIETHFQDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAFRELGKVVRTLFLLHYIDDVE
VRKTINAATNKSEEFNGFVKWAFFAGEGIIAENVQHEQRKIVRYNQLVANLIILHNVEQMTRVLAELRDEGRTIGPEALA
ELSPYRTSHINRLGDYTLDLNREIDSGLGHNRLFFTRIPADPRYPWRKQARQ
>Mature_211_residues
PLDRARRHAAGIHDWALIETHFQDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAFRELGKVVRTLFLLHYIDDVEV
RKTINAATNKSEEFNGFVKWAFFAGEGIIAENVQHEQRKIVRYNQLVANLIILHNVEQMTRVLAELRDEGRTIGPEALAE
LSPYRTSHINRLGDYTLDLNREIDSGLGHNRLFFTRIPADPRYPWRKQARQ

Specific function: Required for transposition of transposon Tn501 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 24692; Mature: 24561

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDRARRHAAGIHDWALIETHFQDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAF
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHH
RELGKVVRTLFLLHYIDDVEVRKTINAATNKSEEFNGFVKWAFFAGEGIIAENVQHEQRK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHH
IVRYNQLVANLIILHNVEQMTRVLAELRDEGRTIGPEALAELSPYRTSHINRLGDYTLDL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCEEEEC
NREIDSGLGHNRLFFTRIPADPRYPWRKQARQ
CCHHHCCCCCCCEEEEECCCCCCCCHHHHCCC
>Mature Secondary Structure 
PLDRARRHAAGIHDWALIETHFQDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAF
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHH
RELGKVVRTLFLLHYIDDVEVRKTINAATNKSEEFNGFVKWAFFAGEGIIAENVQHEQRK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHH
IVRYNQLVANLIILHNVEQMTRVLAELRDEGRTIGPEALAELSPYRTSHINRLGDYTLDL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCEEEEC
NREIDSGLGHNRLFFTRIPADPRYPWRKQARQ
CCHHHCCCCCCCEEEEECCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2994007; 6312271 [H]