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The map label for this gene is 84624536

Identifier: 84624536

GI number: 84624536

Start: 3250467

End: 3250964

Strand: Direct

Name: 84624536

Synonym: XOO_2879

Alternate gene names: NA

Gene position: 3250467-3250964 (Clockwise)

Preceding gene: 84624535

Following gene: 84624538

Centisome position: 65.8

GC content: 61.45

Gene sequence:

>498_bases
GTGCGCGAGTGGATCGGGCGTGGTGCCGGCGAGCGTCGTGCGTTGGCAGCGATCGGCATGAGCGCCAGTGCGCCGCGCTA
TTTCTCGCACGAAGACCGCAACGTCGAGCTGCGCGAGCGCGTTGTTACGTTGGCGCATCGTCATCGCCGTTATGGCGTGG
GAATGATCTATCTCAAACTGCGGCAGGAAGGACGCCTCGTGAACGACAAGCGGGTGGAGCGGTTGTACCGCGAGCAGCAG
CTGCAAGTCCGGCCCCGCAAGCGCAAGAAGGTGCCAGTGAGCGAGCGTCAGCCGTTGTTGCGACCATCGCAGGCCAACCA
GGTGTGGTCGATGGACGTCGTCTCCGACAGCACCTCAGAAAGCCGGGTGATCGAGTGTCTGGTGATCGTGGACGACGCGA
CACACGAAGCAGTGACCATCGAGGGAGCGTGTGCAGAATGTTGTGTAAACGGGATTTGGCTTACAGCTGAGGGATACGCT
CCTCGAACTGGATGGTAA

Upstream 100 bases:

>100_bases
CGCGGCTGAAGAAGCTGCTGGCCGGGCAGCTGTTCGAGAACAATCTGATCAAGGATGCGCTGCGAAAAAAGTGGTGAGCG
CACCGGCACGTCGTGTGCTG

Downstream 100 bases:

>100_bases
AGCGGTTAAGCGCGGCCTTCCAATCGCGGATGGGCAACGTCCACCGCTTGCTGATGTTGCGCAGGGCCAGGGAGAGCAGC
TTGATCAGCGCCTCATCGCT

Product: ISXoo3 transposase orfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MREWIGRGAGERRALAAIGMSASAPRYFSHEDRNVELRERVVTLAHRHRRYGVGMIYLKLRQEGRLVNDKRVERLYREQQ
LQVRPRKRKKVPVSERQPLLRPSQANQVWSMDVVSDSTSESRVIECLVIVDDATHEAVTIEGACAECCVNGIWLTAEGYA
PRTGW

Sequences:

>Translated_165_residues
MREWIGRGAGERRALAAIGMSASAPRYFSHEDRNVELRERVVTLAHRHRRYGVGMIYLKLRQEGRLVNDKRVERLYREQQ
LQVRPRKRKKVPVSERQPLLRPSQANQVWSMDVVSDSTSESRVIECLVIVDDATHEAVTIEGACAECCVNGIWLTAEGYA
PRTGW
>Mature_165_residues
MREWIGRGAGERRALAAIGMSASAPRYFSHEDRNVELRERVVTLAHRHRRYGVGMIYLKLRQEGRLVNDKRVERLYREQQ
LQVRPRKRKKVPVSERQPLLRPSQANQVWSMDVVSDSTSESRVIECLVIVDDATHEAVTIEGACAECCVNGIWLTAEGYA
PRTGW

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 18944; Mature: 18944

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREWIGRGAGERRALAAIGMSASAPRYFSHEDRNVELRERVVTLAHRHRRYGVGMIYLKL
CCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
RQEGRLVNDKRVERLYREQQLQVRPRKRKKVPVSERQPLLRPSQANQVWSMDVVSDSTSE
ECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
SRVIECLVIVDDATHEAVTIEGACAECCVNGIWLTAEGYAPRTGW
CEEEEEEEEEECCCCCEEEECCHHHHHHHCCEEEEECCCCCCCCC
>Mature Secondary Structure
MREWIGRGAGERRALAAIGMSASAPRYFSHEDRNVELRERVVTLAHRHRRYGVGMIYLKL
CCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
RQEGRLVNDKRVERLYREQQLQVRPRKRKKVPVSERQPLLRPSQANQVWSMDVVSDSTSE
ECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
SRVIECLVIVDDATHEAVTIEGACAECCVNGIWLTAEGYAPRTGW
CEEEEEEEEEECCCCCEEEECCHHHHHHHCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]