Click here to switch to the map view.

The map label for this gene is dgoK [H]

Identifier: 84624428

GI number: 84624428

Start: 3123009

End: 3123887

Strand: Direct

Name: dgoK [H]

Synonym: XOO_2771

Alternate gene names: 84624428

Gene position: 3123009-3123887 (Clockwise)

Preceding gene: 84624427

Following gene: 84624429

Centisome position: 63.22

GC content: 69.17

Gene sequence:

>879_bases
GTGATCGCCATCGACTGGGGCACCAGCAGCCTGCGCGGCTACCTGCTCGATGCCGACGGCAAGGTACTTGAGCAGCGCCG
TGGCAGCAACGGCGTCCTCGCCTGCCAGGGCCGCTTCGCCGAGGTACTGGCAGGCTTGGTCGACGGCTGGGACGGCCCGC
TGCTGCTGTCGGGCATGGTCGGCAGCCGCAACGGCTGGGTCGAACAAGCCTATCTGCCCTGCCCCACAGACACTCGCTCG
CTCGCCCTGGCGATGCGCAGCTACGACGACCTGATGCCCGGTCGCACGCTGTGGTTCGTGCCCGGCGTGAGCACCGGCGG
ACAGGCCGGCGTGCCAGACGTGATGCGCGGTGAAGAAACCCAGCTGGTCGGCCTGATCGCCGCACTCGGCGACGGCGCGC
ACGTCGCCTGCCTGCCAGGTACACACAGCAAATGGGCGCGGATCGGCAACGGCCAACTGACCGGGTTTGCCACCGTCATG
ACCGGTGAGCTGTACGCCGTGCTGTGTCAGCACAGCATCCTCGGCAAGCTGATGGAGGACGACCACGCCGCGCTGGACAC
CGATGCGTTTGTGCAGGGCATCGACCGCAGCGCCGCCCCCGGCGGCCTCAGTCACCACCTGTTCGGCACCCGCACACTCG
GCCTGTTCGAACGGCTGTCGTCCGCGGCGCTGCCGTCCTACCTCTCGGGTCTGCTGATCGGCCACGAACTGCGCGAGCAC
CGTGGCGACCACGCCACCGTGCACCTGGTCGGCAGCCCTGGTCTGGCGCAACGCTATGCCCTTGCGCTGCAGCACCTGGG
CGTCGAAAGCCAGCTGCACCCGGAAGATCTGGCGGCGGCGGGGCTGTTCGCACTGGCCAGGCAGCTCAGGCTGGCCTGA

Upstream 100 bases:

>100_bases
ACCATAGCGCCGAGGAACTGGCCCGTACCCCTGAAGCCGGCAGCTTGTACTGGTGCGATCTGCCGGTCGCGGGCTTGCCA
GAGAGCTTGGTGGCCAGCGC

Downstream 100 bases:

>100_bases
CCAGCCATCAGCAAAACATCGACAACCCCACACCCATCACGCGACTGCTTTAGAATTGGAAGGCTAGACGCCGGATTCCG
CCATGCCTTTTGTTGTCACC

Product: 2-oxo-3-deoxygalactonate kinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIAIDWGTSSLRGYLLDADGKVLEQRRGSNGVLACQGRFAEVLAGLVDGWDGPLLLSGMVGSRNGWVEQAYLPCPTDTRS
LALAMRSYDDLMPGRTLWFVPGVSTGGQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWARIGNGQLTGFATVM
TGELYAVLCQHSILGKLMEDDHAALDTDAFVQGIDRSAAPGGLSHHLFGTRTLGLFERLSSAALPSYLSGLLIGHELREH
RGDHATVHLVGSPGLAQRYALALQHLGVESQLHPEDLAAAGLFALARQLRLA

Sequences:

>Translated_292_residues
MIAIDWGTSSLRGYLLDADGKVLEQRRGSNGVLACQGRFAEVLAGLVDGWDGPLLLSGMVGSRNGWVEQAYLPCPTDTRS
LALAMRSYDDLMPGRTLWFVPGVSTGGQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWARIGNGQLTGFATVM
TGELYAVLCQHSILGKLMEDDHAALDTDAFVQGIDRSAAPGGLSHHLFGTRTLGLFERLSSAALPSYLSGLLIGHELREH
RGDHATVHLVGSPGLAQRYALALQHLGVESQLHPEDLAAAGLFALARQLRLA
>Mature_292_residues
MIAIDWGTSSLRGYLLDADGKVLEQRRGSNGVLACQGRFAEVLAGLVDGWDGPLLLSGMVGSRNGWVEQAYLPCPTDTRS
LALAMRSYDDLMPGRTLWFVPGVSTGGQAGVPDVMRGEETQLVGLIAALGDGAHVACLPGTHSKWARIGNGQLTGFATVM
TGELYAVLCQHSILGKLMEDDHAALDTDAFVQGIDRSAAPGGLSHHLFGTRTLGLFERLSSAALPSYLSGLLIGHELREH
RGDHATVHLVGSPGLAQRYALALQHLGVESQLHPEDLAAAGLFALARQLRLA

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=276, Percent_Identity=35.1449275362319, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 30921; Mature: 30921

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIDWGTSSLRGYLLDADGKVLEQRRGSNGVLACQGRFAEVLAGLVDGWDGPLLLSGMV
CEEEECCCCCCCEEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEECCC
GSRNGWVEQAYLPCPTDTRSLALAMRSYDDLMPGRTLWFVPGVSTGGQAGVPDVMRGEET
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCH
QLVGLIAALGDGAHVACLPGTHSKWARIGNGQLTGFATVMTGELYAVLCQHSILGKLMED
HHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
DHAALDTDAFVQGIDRSAAPGGLSHHLFGTRTLGLFERLSSAALPSYLSGLLIGHELREH
CCHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGDHATVHLVGSPGLAQRYALALQHLGVESQLHPEDLAAAGLFALARQLRLA
CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAIDWGTSSLRGYLLDADGKVLEQRRGSNGVLACQGRFAEVLAGLVDGWDGPLLLSGMV
CEEEECCCCCCCEEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEECCC
GSRNGWVEQAYLPCPTDTRSLALAMRSYDDLMPGRTLWFVPGVSTGGQAGVPDVMRGEET
CCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCH
QLVGLIAALGDGAHVACLPGTHSKWARIGNGQLTGFATVMTGELYAVLCQHSILGKLMED
HHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
DHAALDTDAFVQGIDRSAAPGGLSHHLFGTRTLGLFERLSSAALPSYLSGLLIGHELREH
CCHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGDHATVHLVGSPGLAQRYALALQHLGVESQLHPEDLAAAGLFALARQLRLA
CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]