Click here to switch to the map view.

The map label for this gene is yvrE [H]

Identifier: 84624427

GI number: 84624427

Start: 3122101

End: 3123012

Strand: Direct

Name: yvrE [H]

Synonym: XOO_2770

Alternate gene names: 84624427

Gene position: 3122101-3123012 (Clockwise)

Preceding gene: 84624426

Following gene: 84624428

Centisome position: 63.2

GC content: 65.68

Gene sequence:

>912_bases
ATGGTGAGCACGCCCGAACACACCGCCGTGCTGGCGGTCGACAGCCGCTGCACGCACGGCGAAGGCGTGCTGTGGTGCGC
ACGGCGCGAGGCGCTGTACTGGGTCGACATCAGCGAAAAACGCCTGTGGCGGCACCATCCGGCCAGTGCGCAATCGCGCC
ACTGGACGCTGCCCGACCGCCCGGGATGCATCGGCCTGATGGACGACGGTCGCGTGCTGGTCGCGCTGGCCAAGGCGATC
GGGATTGTCGATCCGGACACTATCGAAGAAGACGTGCTGCCCTTCGAAAAACTGGCCGACGTGGAAGCGGACAATCCGCT
CACGCGCAGCAATGATGGTCGCGCCGATCGCAACGGCAATTTCGTATTCGGCACCATGGACGAACACGACACCAAGGCCG
CGCGCGGAGCGATGTACCAGTTCTCGCTGACGCATGGTTTGCGTGCATTGCCGCTGCCAGGCGTATCGATCCCCAACTCG
ATCTGCTTCAGCCCCGACGGCCGCACGCTGTACTACTGCGACTCGGCGCGCCCGCAGATCCTGTGTTGCGACTACGACGC
GCAGACCGCGCAGACCAGCAACACCCGCGTGTTCACCACGTTAGACCGCGACGATGCCGAACCGGACGGATCGATCATCG
ATGCCGAAGGTCACCTGTGGAATGCGCAATGGCGCGCGTGGCGCGTAGTGCGCTATCGCCCCGATGGCAGCGTGGAGCGC
ATCGTGCAACTGCCGGTCAAGCACCCCACCTGCAGCGCGTTCGGTGGCGCCGCGCTGGACCGCCTGCACGTGATCAGCTC
GCGTCTGGACCATAGCGCCGAGGAACTGGCCCGTACCCCTGAAGCCGGCAGCTTGTACTGGTGCGATCTGCCGGTCGCGG
GCTTGCCAGAGAGCTTGGTGGCCAGCGCGTGA

Upstream 100 bases:

>100_bases
TCGGTGTGGAGATCGACGAAGACATGCTCAAGCGCGCAAACGAAAACCCGCCCGACTGGCGCAACCCGGTGTGGCGCCAC
AGCGATGGCAGCATCGCCGA

Downstream 100 bases:

>100_bases
TCGCCATCGACTGGGGCACCAGCAGCCTGCGCGGCTACCTGCTCGATGCCGACGGCAAGGTACTTGAGCAGCGCCGTGGC
AGCAACGGCGTCCTCGCCTG

Product: regucalcin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVSTPEHTAVLAVDSRCTHGEGVLWCARREALYWVDISEKRLWRHHPASAQSRHWTLPDRPGCIGLMDDGRVLVALAKAI
GIVDPDTIEEDVLPFEKLADVEADNPLTRSNDGRADRNGNFVFGTMDEHDTKAARGAMYQFSLTHGLRALPLPGVSIPNS
ICFSPDGRTLYYCDSARPQILCCDYDAQTAQTSNTRVFTTLDRDDAEPDGSIIDAEGHLWNAQWRAWRVVRYRPDGSVER
IVQLPVKHPTCSAFGGAALDRLHVISSRLDHSAEELARTPEAGSLYWCDLPVAGLPESLVASA

Sequences:

>Translated_303_residues
MVSTPEHTAVLAVDSRCTHGEGVLWCARREALYWVDISEKRLWRHHPASAQSRHWTLPDRPGCIGLMDDGRVLVALAKAI
GIVDPDTIEEDVLPFEKLADVEADNPLTRSNDGRADRNGNFVFGTMDEHDTKAARGAMYQFSLTHGLRALPLPGVSIPNS
ICFSPDGRTLYYCDSARPQILCCDYDAQTAQTSNTRVFTTLDRDDAEPDGSIIDAEGHLWNAQWRAWRVVRYRPDGSVER
IVQLPVKHPTCSAFGGAALDRLHVISSRLDHSAEELARTPEAGSLYWCDLPVAGLPESLVASA
>Mature_303_residues
MVSTPEHTAVLAVDSRCTHGEGVLWCARREALYWVDISEKRLWRHHPASAQSRHWTLPDRPGCIGLMDDGRVLVALAKAI
GIVDPDTIEEDVLPFEKLADVEADNPLTRSNDGRADRNGNFVFGTMDEHDTKAARGAMYQFSLTHGLRALPLPGVSIPNS
ICFSPDGRTLYYCDSARPQILCCDYDAQTAQTSNTRVFTTLDRDDAEPDGSIIDAEGHLWNAQWRAWRVVRYRPDGSVER
IVQLPVKHPTCSAFGGAALDRLHVISSRLDHSAEELARTPEAGSLYWCDLPVAGLPESLVASA

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=290, Percent_Identity=31.0344827586207, Blast_Score=124, Evalue=9e-29,
Organism=Homo sapiens, GI4759036, Length=290, Percent_Identity=31.0344827586207, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI45551448, Length=274, Percent_Identity=27.3722627737226, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24641471, Length=275, Percent_Identity=27.6363636363636, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI18860103, Length=275, Percent_Identity=27.6363636363636, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24641469, Length=275, Percent_Identity=27.6363636363636, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24646912, Length=274, Percent_Identity=25.1824817518248, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646910, Length=274, Percent_Identity=25.1824817518248, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 33473; Mature: 33473

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTPEHTAVLAVDSRCTHGEGVLWCARREALYWVDISEKRLWRHHPASAQSRHWTLPDR
CCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCHHHHHHCCCCCCCCCCCCCCCC
PGCIGLMDDGRVLVALAKAIGIVDPDTIEEDVLPFEKLADVEADNPLTRSNDGRADRNGN
CCEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
FVFGTMDEHDTKAARGAMYQFSLTHGLRALPLPGVSIPNSICFSPDGRTLYYCDSARPQI
EEEEECCCCCHHHHHCEEEEEEHHCCCEECCCCCCCCCCCEEECCCCCEEEEECCCCCEE
LCCDYDAQTAQTSNTRVFTTLDRDDAEPDGSIIDAEGHLWNAQWRAWRVVRYRPDGSVER
EEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEECCCEEEEEEEEECCCCCHHH
IVQLPVKHPTCSAFGGAALDRLHVISSRLDHSAEELARTPEAGSLYWCDLPVAGLPESLV
HEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCCCHHHH
ASA
CCC
>Mature Secondary Structure
MVSTPEHTAVLAVDSRCTHGEGVLWCARREALYWVDISEKRLWRHHPASAQSRHWTLPDR
CCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCHHHHHHCCCCCCCCCCCCCCCC
PGCIGLMDDGRVLVALAKAIGIVDPDTIEEDVLPFEKLADVEADNPLTRSNDGRADRNGN
CCEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
FVFGTMDEHDTKAARGAMYQFSLTHGLRALPLPGVSIPNSICFSPDGRTLYYCDSARPQI
EEEEECCCCCHHHHHCEEEEEEHHCCCEECCCCCCCCCCCEEECCCCCEEEEECCCCCEE
LCCDYDAQTAQTSNTRVFTTLDRDDAEPDGSIIDAEGHLWNAQWRAWRVVRYRPDGSVER
EEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEECCCEEEEEEEEECCCCCHHH
IVQLPVKHPTCSAFGGAALDRLHVISSRLDHSAEELARTPEAGSLYWCDLPVAGLPESLV
HEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCCCCCCHHHH
ASA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]