| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is insI1 [C]
Identifier: 84624352
GI number: 84624352
Start: 3028877
End: 3029770
Strand: Direct
Name: insI1 [C]
Synonym: XOO_2695
Alternate gene names: 84624352
Gene position: 3028877-3029770 (Clockwise)
Preceding gene: 84624351
Following gene: 84624353
Centisome position: 61.31
GC content: 64.65
Gene sequence:
>894_bases ATGTCGATGCGCGCCATCGCCGATGTATTGGCGCGTGCGCCCAGCACGATCAGTCGTGAGCTGCGCCGCAATCAGCACGC TGCGCGGTACCGGCCCGATCACGCGCAGCGCATCAGCGCCCATCGGCGCACGCAGGCCAGCCGGCGTCCACGCATCGACG CCGAGCGTATCGGCCAGAGCGAGGTCCTGCTGAGGGAGGACGTCAGTCCCGAACAGATCGCCGGTCGCACCGGCTTGGCC AGTCACGCATGGATCTATCGGCACATCGACGCCGATCAGAAGCGCGGTGGTCAGTTGTTCATGCATCTACGCAAACGCCG CCGCAAGCGCCGGCGGCGTGGCGTGCGCGATGGCCGCGGGCAGCTGACGCATCGGCGCAGCTGGACACAGCGCCCCAGTG TGGTTGAGCAGCGCAGCCGCATCGGCGACTGGGAGCTGGAGACCATCAGGGCCTCGCACGGAAAGGGCGTGGTGGTCAGC ATGACCGAACGCCGCAGTCGCCTGCATCTGCTGGCTTACTCGCCCGACGGCACCGCCGAGAACGTGCGCAACGCCATTGT CCAGCGACTGGGCGGCCTGCGCCATGCAGTTCACACCCTCACCGCCGACAACGGCAAGGAGTTCGCCGATCATCGGCTCA TTGCCGCCTGCCTGCAGAGCGATTTCTATTTCGCAGATCCGTACTGCCCATGGCAGCGCGGCAGCAACGAGAATGCCAAC GGATTGACACGCCAATACCTGCCACGACAGACCGATGTCAGCACCATCACCGATGCGCACCTGCGATGGATCGAGCCGCG GCTCTACAATCGTCCGCGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAACAGCGTTG CGAATCAGAGTTGA
Upstream 100 bases:
>100_bases CCTGACCTGAGCACTTCACCGCCAAGTGGAGTTGCCCATGTCATCCAGCCGCCTTGACCTATCGGAATGATACCGCCTAC ATGCGTTATATGAAACCGGG
Downstream 100 bases:
>100_bases ATCCGCCACACCGAGATCAAACGACTGGCGCAAGCTGCAGCCAATGGCGATGTCAGCCGGCGCAGCGATGCAACGCGCTT CAAGCACGATTCGGCGCGCA
Product: IS1112 transposase
Products: NA
Alternate protein names: Transposon TN4551 [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSMRAIADVLARAPSTISRELRRNQHAARYRPDHAQRISAHRRTQASRRPRIDAERIGQSEVLLREDVSPEQIAGRTGLA SHAWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGKGVVVS MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENAN GLTRQYLPRQTDVSTITDAHLRWIEPRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
Sequences:
>Translated_297_residues MSMRAIADVLARAPSTISRELRRNQHAARYRPDHAQRISAHRRTQASRRPRIDAERIGQSEVLLREDVSPEQIAGRTGLA SHAWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGKGVVVS MTERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENAN GLTRQYLPRQTDVSTITDAHLRWIEPRLYNRPRKILGFKTPLEVFSEEVLNSVANQS >Mature_296_residues SMRAIADVLARAPSTISRELRRNQHAARYRPDHAQRISAHRRTQASRRPRIDAERIGQSEVLLREDVSPEQIAGRTGLAS HAWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGKGVVVSM TERRSRLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENANG LTRQYLPRQTDVSTITDAHLRWIEPRLYNRPRKILGFKTPLEVFSEEVLNSVANQS
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=315, Percent_Identity=31.1111111111111, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1790736, Length=315, Percent_Identity=31.1111111111111, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1787671, Length=315, Percent_Identity=31.1111111111111, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 34322; Mature: 34191
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRAIADVLARAPSTISRELRRNQHAARYRPDHAQRISAHRRTQASRRPRIDAERIGQS CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCH EVLLREDVSPEQIAGRTGLASHAWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRG HHHHHCCCCHHHHHCCCCCCHHHHHEEECCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC QLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGKGVVVSMTERRSRLHLLAYSPDGTAE CHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCHH NVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENAN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC GLTRQYLPRQTDVSTITDAHLRWIEPRLYNRPRKILGFKTPLEVFSEEVLNSVANQS CCHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMRAIADVLARAPSTISRELRRNQHAARYRPDHAQRISAHRRTQASRRPRIDAERIGQS CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCH EVLLREDVSPEQIAGRTGLASHAWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRG HHHHHCCCCHHHHHCCCCCCHHHHHEEECCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC QLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGKGVVVSMTERRSRLHLLAYSPDGTAE CHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCHH NVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQSDFYFADPYCPWQRGSNENAN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCC GLTRQYLPRQTDVSTITDAHLRWIEPRLYNRPRKILGFKTPLEVFSEEVLNSVANQS CCHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2820936 [H]