Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ynhA [C]

Identifier: 84624182

GI number: 84624182

Start: 2818997

End: 2819434

Strand: Direct

Name: ynhA [C]

Synonym: XOO_2525

Alternate gene names: 84624182

Gene position: 2818997-2819434 (Clockwise)

Preceding gene: 84624181

Following gene: 84624183

Centisome position: 57.06

GC content: 62.33

Gene sequence:

>438_bases
ATGACCACCTCCCCCTTCCCGCTCGAACCTACAGCCACCGAAGCGCAGGCCGCCATTGCCGAGGAATTTTCCTTTTTCGG
CGACTGGTCCGAGCGCTATCAGTACCTGATCGATCTTGGCCGCAAGTTGCCCGCCTTTCCGGAACACTGGAAGACCGAAG
AACACCGTCTGCATGGCTGCCAGTCGATGGTGTGGATCGTGCCGGAAGGCAATGCCGAACGGCTGGATTTCCACGCCGTC
AGCGATTCGGCCATCGTCTCGGGGCTGATCTATCTCGCCTTGCGCGTGTATTCGGGACGTAGCGCGCAAGAGATCCTGGC
GACCGAGCCGGACTACATCGCCGGGATCGGCCTGACCAAGCATCTGTCGCCGACCCGCAGTAACGGCGTGGCCGCGATGC
TCGCCTTCATTCGCGACACCGCGCGCACGCAGCAGTGA

Upstream 100 bases:

>100_bases
CCGCGCGCCAGTGGCGCGCAAACCGCGCCTTCTCGCCCCGGCGGGAGAGGGGCTTTTACCGAACGCCCCTGGATTTTTGC
GAACGATTCTGGAACCTTCG

Downstream 100 bases:

>100_bases
GCACGCCCACACCCTTGCCCGCCGATTCGCTGCGCACGCTGTTTGCTCACCCAGGCTTCGGCCTGGTGCTGCTGTATCGC
GTGGCGGCGATGCTGTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEHWKTEEHRLHGCQSMVWIVPEGNAERLDFHAV
SDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLTKHLSPTRSNGVAAMLAFIRDTARTQQ

Sequences:

>Translated_145_residues
MTTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEHWKTEEHRLHGCQSMVWIVPEGNAERLDFHAV
SDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLTKHLSPTRSNGVAAMLAFIRDTARTQQ
>Mature_144_residues
TTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEHWKTEEHRLHGCQSMVWIVPEGNAERLDFHAVS
DSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLTKHLSPTRSNGVAAMLAFIRDTARTQQ

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1787969, Length=117, Percent_Identity=35.042735042735, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1789176, Length=138, Percent_Identity=31.8840579710145, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 16184; Mature: 16053

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEHWKTEEHRLHGC
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
QSMVWIVPEGNAERLDFHAVSDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLTK
CEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCHH
HLSPTRSNGVAAMLAFIRDTARTQQ
CCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEHWKTEEHRLHGC
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC
QSMVWIVPEGNAERLDFHAVSDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLTK
CEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCHH
HLSPTRSNGVAAMLAFIRDTARTQQ
CCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7756693; 11481430 [H]