| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624164
Identifier: 84624164
GI number: 84624164
Start: 2799192
End: 2800190
Strand: Direct
Name: 84624164
Synonym: XOO_2507
Alternate gene names: NA
Gene position: 2799192-2800190 (Clockwise)
Preceding gene: 84624163
Following gene: 84624165
Centisome position: 56.66
GC content: 62.66
Gene sequence:
>999_bases ATGGTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCGGC GTTCCTCAAGCGCTATGGCAACGCGCAGCAGTGCGAGCAGGCGTTGGAGATCTCGCGCTGGCCACAGGGCTTTGTTTGTC CGCGTTGCGCCGCTACCGCGCACAGTCGATTCCAGCGTCACGGCACCACGTACTGGCAGTGCACGGCCTGCTATCGCCAG ACCAGCCTGCGCTCGGGCACGGTGATGGACAACAGCAAGCTGCCGCTACGCACCTGGCTGCTTGGCATGTATCTGCTGGG CCAGAGTAAGACGAACCTGTCGGCGCTGGAGTTGATGCGACACCTGGGAGTGAGTTACCCGACAGCGTGGCCAATGAAGC ACAAGCTGATGCAGGCCATGACCCAACGCGAGGCGAACCGCAAGTTGGGCGGGATCGTGCAACTGGACGATGCCTACCTG GGCGGAGAACGCAACGGTGGCAAGGCCAGGCGCGGCTCGGAGAACAAGCGCCCTTTCGTGATCGCCGTGGAGACCACTGA AGACGGTCGTCCATTGCGCGCGGTGATGGATCCGGTCCCAGGCTTCACCAAGGCGGCGCTGTCGGAATGGATCGGGCAAC GCCTGCATCCTGGAGCAGATGTCTACAGTGATGGACTCGGTGCGTTTCGAGCACTGGAAGCCGAGCACGCGCACACCGTG ATCGAAGGCAGCGGTCGAAGTCGCTGCGAGGCAGAGAACGCACGCTGGGTCAACGTGGTGTTGTCCAACCTAAAGCGTTC GCTGGACGGTGCCTATCACGCCTTCAAATTCGCCAAATACGCCCAGCGCTACTTGGCAGAGACGATGTGGCGGTTCAACC GCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGGCCCTG CGTGATGTCACCCTGTTCACCGCTGAAAGTGCGTGCTAA
Upstream 100 bases:
>100_bases GCGGTGGCCGGCAGCGCACCGTAAGCGAAGGAGAGACATCATGGATCCTGATTAGCACGATCTTTCAGCACAGTCGCAGC CAGTGAGAGCCGACCGGTTG
Downstream 100 bases:
>100_bases TCAGGTCATGGATTTCGTATTGCTCGATTACACAACCCTGCGCGTGATCTGGTGGCTGTTGCTCGGTGTGCTGCTGTCCG GTTACGCCGTGATGAGTGGC
Product: ISXo5 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL GGERNGGKARRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTLFTAESAC
Sequences:
>Translated_332_residues MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL GGERNGGKARRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTLFTAESAC >Mature_332_residues MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATAHSRFQRHGTTYWQCTACYRQ TSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYL GGERNGGKARRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERAL RDVTLFTAESAC
Specific function: Unknown
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 37267; Mature: 37267
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH HLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKARRGSENKRPFV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVPSLLAAAAASKPWSERALRDVTLFTAESAC HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCC >Mature Secondary Structure MVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQALEISRWPQGFVCPRCAATA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH HSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLSALELMR HHHHHHCCCCEEEHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH HLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKARRGSENKRPFV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE IAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTV EEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE IEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVPSLLAAAAASKPWSERALRDVTLFTAESAC HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6306577; 9847077; 11016950 [H]