Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is insI1 [C]

Identifier: 84624162

GI number: 84624162

Start: 2797049

End: 2798017

Strand: Direct

Name: insI1 [C]

Synonym: XOO_2505

Alternate gene names: 84624162

Gene position: 2797049-2798017 (Clockwise)

Preceding gene: 84624159

Following gene: 84624163

Centisome position: 56.62

GC content: 62.64

Gene sequence:

>969_bases
ATGGAGTTGCCCATGTCATCCAGCCGCCTGGACCTGTCAGAACGATACCGCCTACATGCGTTATATGAAACCGGGATGTC
GATGCACGCCATCGCCGATGCAGTGGCGCGTGCGCCCAGCACGATCAGTCGTGAGCTGCGCCGCAACCGGCACGCGGCGA
AGTATCGGCCCGATCACGCGCAGCGCATCAGCGAGCATCGGCGCGCACAGGCCAGCCGGCGACCACGCATCGACGCTGAG
CGTATCCGTCAGATCGAGGTCCTGCTGAGGGAGGACTTCAGTCCCGAACAGATCGCCGGCCGCACCGGCTTGGCCAGTCA
CGAATGGATCTATCGGCACATCGACGCCGATCAGAAGCGCGGTGGTCAGTTGTTCATGCATCTACGCAAACGCCGCCGCA
AGCGCCGTCGGCGTGGCGTGCGCGATGGCCGCGGGCAGCTGACGCATCGGCGCAGCTGGACACAGCGCCCCAGTGTGGTT
GAGCAGCGAAGCCGTATCGGCGACTGGGAGCTGGATACCATCAGGGCCTCGCACGGAAAGGGCGTGGTGGTCAGCATGAC
CGAACGCCGCAGTCGCCTGCATCTGCTGGCTTACTCGCCCGACGGCACTGCCGAGAACGTGCGCAACGCCACTGTCCAGC
GACTGGGCGGCCTGCGCCATGCAGTTCACACCCTCACCGCCGACAACGGCAAGGAGTTCGCTGATCATCGGCTCATTGCC
GCCTGCCTGCAGAGCGATTTCTATTTCGCAGATCCGTACTGCCCATGGCAGCGCGGCAGCAACGAGAATGCCAACGGATT
GACACGCCAATACTTGCCACGACAGACCGATTTCAGCACCATCACCGATGCGCACCTGCGATGGATCGAGCAGCGGCTCT
ACAATCGTCCGCGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAACAGCGTTGCGAAT
CAGAGTTGA

Upstream 100 bases:

>100_bases
CTGGGTCTGCTTTTTTTTGGGGGCGGCTTCAACTCTGGATCGCAACACCAACGGTTGTGACGTGATCCAGGCGACCTGAC
CTGAGCGACTTCACTACCAA

Downstream 100 bases:

>100_bases
ATTCGCCCCCCGCTGGAATCGCCTCTGGAATCGCCTGAGTAAAGTGCAGCACTTGGTTACCACCTGGCTGGTGGCGTTGG
GCAGCAACTTCTCGGCGTCG

Product: IS1112 transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MELPMSSSRLDLSERYRLHALYETGMSMHAIADAVARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRIDAE
RIRQIEVLLREDFSPEQIAGRTGLASHEWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV
EQRSRIGDWELDTIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNATVQRLGGLRHAVHTLTADNGKEFADHRLIA
ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN
QS

Sequences:

>Translated_322_residues
MELPMSSSRLDLSERYRLHALYETGMSMHAIADAVARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRIDAE
RIRQIEVLLREDFSPEQIAGRTGLASHEWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV
EQRSRIGDWELDTIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNATVQRLGGLRHAVHTLTADNGKEFADHRLIA
ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN
QS
>Mature_322_residues
MELPMSSSRLDLSERYRLHALYETGMSMHAIADAVARAPSTISRELRRNRHAAKYRPDHAQRISEHRRAQASRRPRIDAE
RIRQIEVLLREDFSPEQIAGRTGLASHEWIYRHIDADQKRGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVV
EQRSRIGDWELDTIRASHGKGVVVSMTERRSRLHLLAYSPDGTAENVRNATVQRLGGLRHAVHTLTADNGKEFADHRLIA
ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKILGFKTPLEVFSEEVLNSVAN
QS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=331, Percent_Identity=32.3262839879154, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790736, Length=331, Percent_Identity=32.3262839879154, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787671, Length=331, Percent_Identity=32.3262839879154, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 37511; Mature: 37511

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPMSSSRLDLSERYRLHALYETGMSMHAIADAVARAPSTISRELRRNRHAAKYRPDHA
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHH
QRISEHRRAQASRRPRIDAERIRQIEVLLREDFSPEQIAGRTGLASHEWIYRHIDADQKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCHHC
GGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELDTIRASHGK
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHEECCCCC
GVVVSMTERRSRLHLLAYSPDGTAENVRNATVQRLGGLRHAVHTLTADNGKEFADHRLIA
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKI
HHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
LGFKTPLEVFSEEVLNSVANQS
HCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELPMSSSRLDLSERYRLHALYETGMSMHAIADAVARAPSTISRELRRNRHAAKYRPDHA
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHH
QRISEHRRAQASRRPRIDAERIRQIEVLLREDFSPEQIAGRTGLASHEWIYRHIDADQKR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCCCHHC
GGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELDTIRASHGK
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHEECCCCC
GVVVSMTERRSRLHLLAYSPDGTAENVRNATVQRLGGLRHAVHTLTADNGKEFADHRLIA
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ACLQSDFYFADPYCPWQRGSNENANGLTRQYLPRQTDFSTITDAHLRWIEQRLYNRPRKI
HHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH
LGFKTPLEVFSEEVLNSVANQS
HCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]