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The map label for this gene is IS1086 [H]

Identifier: 84624141

GI number: 84624141

Start: 2764204

End: 2764647

Strand: Direct

Name: IS1086 [H]

Synonym: XOO_2484

Alternate gene names: 84624141

Gene position: 2764204-2764647 (Clockwise)

Preceding gene: 84624140

Following gene: 84624142

Centisome position: 55.95

GC content: 60.36

Gene sequence:

>444_bases
ATGTCAAAAAGCTATCAACACCCCAGTGCGGAAGAGCGCGCAATGCTCCAGATCGAGAGGGGGCGCGGTCAAAGTGTGCG
CGCGATTTCCAGGATTTTAGGCAGGAGCCCGTCGACATTGAGTCGGGAATTGGCCAAGCAGGACAGTACCACCTATTGCG
CGCGCAGTGCGGGCAAGCGCTACCGCGCACGGCGTCAGCTTAGCGTCCGGCAGCGGCGACTGACGCCAGGAACGCCGTTA
TTCCAGCTGGTGCGAGATCATCTGGTGCTATGGCGCTGGTCGCCCCAGCAGATTGCTGCCAAGCTCTCGCATATGTATCC
GGATGATCCTGCCCAGCGCGTCAGCCACGAAACCATTTACGCTAGCATCTACGCGCATCCGCGTGGGGGCTTGAAGAAGG
AACTGGTCCAGGCCCTGCGTCAGCACAAGCCCAAACGCGGATGA

Upstream 100 bases:

>100_bases
TCCACTGGTCCAGCTGAGCCATCGGCTGCCGTGGAGTGCGTTGGAGCAGCTTAGACTCAATTTCCAAGTGCAACACCCTC
TCAGCAGTTAGGGTATGCAC

Downstream 100 bases:

>100_bases
CGGCGTACAACGGCGGCCACACGCAGCTGGGTGCCGGAGGAGTTGCGGATTGTGCATCGCCCCGAAGAAGTGCAGACGCG
CTTGGTCCCAGGTCATTGGG

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSKSYQHPSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKRYRARRQLSVRQRRLTPGTPL
FQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIYASIYAHPRGGLKKELVQALRQHKPKRG

Sequences:

>Translated_147_residues
MSKSYQHPSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKRYRARRQLSVRQRRLTPGTPL
FQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIYASIYAHPRGGLKKELVQALRQHKPKRG
>Mature_146_residues
SKSYQHPSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKRYRARRQLSVRQRRLTPGTPLF
QLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIYASIYAHPRGGLKKELVQALRQHKPKRG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 16940; Mature: 16809

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSYQHPSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKR
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
YRARRQLSVRQRRLTPGTPLFQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
ASIYAHPRGGLKKELVQALRQHKPKRG
HHEEECCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKSYQHPSAEERAMLQIERGRGQSVRAISRILGRSPSTLSRELAKQDSTTYCARSAGKR
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
YRARRQLSVRQRRLTPGTPLFQLVRDHLVLWRWSPQQIAAKLSHMYPDDPAQRVSHETIY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
ASIYAHPRGGLKKELVQALRQHKPKRG
HHEEECCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]