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The map label for this gene is IS1086 [H]

Identifier: 84624142

GI number: 84624142

Start: 2764678

End: 2765220

Strand: Direct

Name: IS1086 [H]

Synonym: XOO_2485

Alternate gene names: 84624142

Gene position: 2764678-2765220 (Clockwise)

Preceding gene: 84624141

Following gene: 84624143

Centisome position: 55.96

GC content: 57.64

Gene sequence:

>543_bases
GTGCCGGAGGAGTTGCGGATTGTGCATCGCCCCGAAGAAGTGCAGACGCGCTTGGTCCCAGGTCATTGGGAAGGCGACTT
GATCAAGGGCGCATTCAATCGTTCTTGCGTGGGCACGTTGGTGGAACGCAAGACGCGCTTTGTCGTGCTGTGCCGCATGG
ATGGCTGCACGGCCGCAGATGCGCTGGAAGGGTTTACCCGGCAAATGAAGAAACTGCCGGCCTCAATGCGGACAAGTCTG
ACCTACGATCGCGGTACCGAGCTCACGTGCTACGCCGAGCTGATGCAAGGATTGAACATCGACGTGTGGTTCGCTGATCC
ACATGCGCCGTGGCAGCGGGGAAGTAACGAGAACACCAACGGCCTGCTGCGCCAATTCCTGCCCAAGGGCGCCGACCTGT
CCACTGTCAGCCAAGAGTATCTCAATCACATCGCACTGCTGATGAATACCCGCCCTCGTCAGACGCTCGGATGGAAGACA
CCAAGCGAGGCAATGGAGAAAGAAATCGCAGCACTCAAATCACGTGTTGCACTTGAATCTTGA

Upstream 100 bases:

>100_bases
GCATCCGCGTGGGGGCTTGAAGAAGGAACTGGTCCAGGCCCTGCGTCAGCACAAGCCCAAACGCGGATGACGGCGTACAA
CGGCGGCCACACGCAGCTGG

Downstream 100 bases:

>100_bases
GACTGCCCTGTGTCGGGATTCGGGTAGTCTACGGGTGGAGGGGTATTTCAGCAGCCTGCCAAGCAAAAACCTCGCCTGGA
AGGCGAGGCCTGGATCATTC

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSL
TYDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKT
PSEAMEKEIAALKSRVALES

Sequences:

>Translated_180_residues
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSL
TYDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKT
PSEAMEKEIAALKSRVALES
>Mature_179_residues
PEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAADALEGFTRQMKKLPASMRTSLT
YDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTNGLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTP
SEAMEKEIAALKSRVALES

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=164, Percent_Identity=42.6829268292683, Blast_Score=151, Evalue=2e-38,
Organism=Escherichia coli, GI1790736, Length=164, Percent_Identity=42.6829268292683, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI1787671, Length=164, Percent_Identity=42.6829268292683, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20361; Mature: 20229

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAAD
CCCCCEEEECCHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCHHH
ALEGFTRQMKKLPASMRTSLTYDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTN
HHHHHHHHHHHCCHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEECCCCCHHHCCCCCCHH
GLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTPSEAMEKEIAALKSRVALES
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEELRIVHRPEEVQTRLVPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTAAD
CCCCEEEECCHHHHHEECCCCCCCCHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCHHH
ALEGFTRQMKKLPASMRTSLTYDRGTELTCYAELMQGLNIDVWFADPHAPWQRGSNENTN
HHHHHHHHHHHCCHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEECCCCCHHHCCCCCCHH
GLLRQFLPKGADLSTVSQEYLNHIALLMNTRPRQTLGWKTPSEAMEKEIAALKSRVALES
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]